Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0291 ATGGCTAACGAGGAAGACGACCTCGATCTTCTCCTTTCTCTCCAAGATAAAATTATCGAAACTCCTCCTGGAACTCCGCCTCACACCTCAGATTTTCTATCCGACGATGAATCTCCAAGACGAGCGGGGCCTGCGGATATGTCTGTCTTCAGAAACGCCGTCAAAGACTGCCTTGACTATGACCACATACCAACAACTCAAAAAACTGGAAAAACAAACCGGTCAAAGGTCTCTAATGATGTTGCAATCGAGAAGTTTTCTGGTTTGCGAGTGAGCAATCAACTGGTAGAACCCGCAGAGCTTCGCGATCGTTTTTCTGATATACGCTTTGTTCGTTTGTCTACCATAAAGAATCTGTTGGTTGGGGACACCCTTTCAGGCTGTTGGGTAACTGTCGGAGTGTTGACTGAGAAAGGGAGTCCAAAGACAAGCTCTACAGGGAAAGCATACTGCATCTGGAAACTTAGTTGTTTGGATGAAAACAGTGTTTCTGTTTTCTTATTTGGTGACGCTTATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCACTTTTTAACTCTACCGTACGCAAGGATGCAGTGGGCATGGGGTTTTCTTTAAGTGCGTATCAACCAAGCCAGTTGTTAAAGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGAAGAAAGAGGGGATGACTTGTACAACAGTTATAAATAGGCGACGTGGCATATACTGTAAATATCATAAATCCAAGGCATCAGATAAATATTCCACAACCACACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATCATCATCTCAAGGCAGAAGGAGTTTACATGGTAGATCGGCTAGCTGGTAAAGTGAATTTTAAAAAGCCAGCACCGCCGGTAAAACTGTTGTCTGTAGAAAGCCTGAAAAAAACATTGAGCAATGCAGATAAAGTGACCACCAATGTACACTCACAAGGGAAAAGATTCCTTGCTGAGATCACAGGGAAATTGAGTAATAAAAGTGTAAATAAAGAAATAGCCAAACAAAATCAGCAGAGGATCAGTTCAGAGAAGACGTCAATTTTGAAGTCATCTACCATGAAATCAGGAGTTGGAAATCAACAACCAGATCCAAAAAGAAAGAAAACTGACCACGCACCGGCAGACAAAACCACACCAAATTTCGAAAAGATGATCGAGTTGGATTATGCTAGTTCAGATGATGATATCGACTTTACATTCACGTTCACCTGA 1257 42.48 MANEEDDLDLLLSLQDKIIETPPGTPPHTSDFLSDDESPRRAGPADMSVFRNAVKDCLDYDHIPTTQKTGKTNRSKVSNDVAIEKFSGLRVSNQLVEPAELRDRFSDIRFVRLSTIKNLLVGDTLSGCWVTVGVLTEKGSPKTSSTGKAYCIWKLSCLDENSVSVFLFGDAYKRNCKELAGTVFALFNSTVRKDAVGMGFSLSAYQPSQLLKMGTSDDYGVCKGKKKEGMTCTTVINRRRGIYCKYHKSKASDKYSTTTRTELKGGNLRTAFRDHHLKAEGVYMVDRLAGKVNFKKPAPPVKLLSVESLKKTLSNADKVTTNVHSQGKRFLAEITGKLSNKSVNKEIAKQNQQRISSEKTSILKSSTMKSGVGNQQPDPKRKKTDHAPADKTTPNFEKMIELDYASSDDDIDFTFTFT 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2644498 2648967 + Hsped.08g02910.1 Hepe08g0291 576263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0291 418 Gene3D - 74 248 IPR012340 -
Hepe08g0291 418 MobiDBLite consensus disorder prediction 349 374 - -
Hepe08g0291 418 PANTHER PROTEIN MCM10 HOMOLOG 2 383 IPR040184 GO:0003688(PANTHER)|GO:0003690(InterPro)|GO:0003697(PANTHER)|GO:0003697(InterPro)|GO:0006270(InterPro)|GO:0006270(PANTHER)|GO:0043596(PANTHER)
Hepe08g0291 418 Pfam MCM10 OB-fold 85 211 IPR055065 -
Hepe08g0291 418 Pfam Primase zinc finger 214 256 IPR015408 GO:0005634(InterPro)|GO:0006260(InterPro)
Hepe08g0291 418 MobiDBLite consensus disorder prediction 349 396 - -
Hepe08g0291 418 FunFam DNA replication licensing factor mcm10 75 249 - -
Hepe08g0291 418 MobiDBLite consensus disorder prediction 376 392 - -
Hepe08g0291 418 MobiDBLite consensus disorder prediction 17 44 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0291 K10736 - csv:101219022 679.863