Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0294 | ATGGAAGATGGAGAGCTCGAATCCTCGAATCCAGAAGTGTTTTCGAGTTCGAATGTCGAGCTTCCGAGCAGTTGCTCGATGGATAGCTTCTTTGATGAATTTCTGAAGGATACTCATGCTTGCACACATGCTCATACTTGCAACCCTCCTGGTCCTGATTATTCACATACGCACACCTGTTTTCATGTCCATACTAAAATTGTCTCTTCCCCCACCGAAGAAAAGGTTTCCACTGATGACACAGCGGAGTCTGTGGATAAAAAGAGTAAGAAACGCCCGCTAGGTAACCGCGAAGCAGTTCGTAAATACCGGGAGAAGAAAAAGGCGAGGGCTGCATCGTTGGAAGATGAAGTTGTGAGATTGAGGACCCTGAATCAGCAACTGTTGAAGAGATTGCAAGGTCAGGCTGCATTGGAGGCTGAGATTTCCAGGCTCAAGTGTTTGCTTGTGGATATTCGGGGAAGAATTGAAGGGGAGATTGGAACATTTCCATATCAGAAACCAGCCAATTCAAATCTGCCTAATCAAAATGTGCCTGGTAGTTACATGATGAATCCATGTAATGTGCAATGCAATGATCAGGCGTATTGCCTTCATGAAGGGGCCAATGGAAAAAGTGGAGAGAGCGGTATGTTGAATGGGCAAAGTTTTAGTGCGTGTGACTTTGAAAATCTTCAGTGCTTGGGAAATCAAAACACAGGAGCAAAGGAACTTCCTGACTGTGGATTTGGGGACACAATTTCTAACGTTAATTGCTCAGAATTAAATCAGAAGAAAGGTGTATATGAAAGACTCTGTCCAAGTTATGTGTTATAA | 816 | 43.75 | MEDGELESSNPEVFSSSNVELPSSCSMDSFFDEFLKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTAESVDKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRTLNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGTFPYQKPANSNLPNQNVPGSYMMNPCNVQCNDQAYCLHEGANGKSGESGMLNGQSFSACDFENLQCLGNQNTGAKELPDCGFGDTISNVNCSELNQKKGVYERLCPSYVL | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2667962 | 2669302 | + | Hsped.08g02940.1 | Hepe08g0294 | 576266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0294 | 271 | Gene3D | - | 74 | 152 | - | - | |
Hepe08g0294 | 271 | CDD | bZIP | 90 | 143 | - | - | |
Hepe08g0294 | 271 | SMART | brlzneu | 83 | 151 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0294 | 271 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Hepe08g0294 | 271 | MobiDBLite | consensus disorder prediction | 71 | 96 | - | - | |
Hepe08g0294 | 271 | FunFam | Basic leucine zipper 24 | 74 | 152 | - | - | |
Hepe08g0294 | 271 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 86 | 133 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0294 | 271 | MobiDBLite | consensus disorder prediction | 76 | 96 | - | - | |
Hepe08g0294 | 271 | Pfam | Basic region leucine zipper | 86 | 133 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0294 | 271 | Coils | Coil | 97 | 131 | - | - | |
Hepe08g0294 | 271 | PANTHER | CCAAT/ENHANCER BINDING PROTEIN | 1 | 184 | IPR031106 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER) | |
Hepe08g0294 | 271 | SUPERFAMILY | Leucine zipper domain | 88 | 134 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0426 | Hepe-Chr2:4083582 | Hepe08g0294 | Hepe-Chr8:2667962 | 2.79e-108 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56094 | PF07716 | bZIP_2 | 3.40E-15 | CL0018 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0294 | K25785 | - | csv:101219501 | 481.87 |