Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0294 ATGGAAGATGGAGAGCTCGAATCCTCGAATCCAGAAGTGTTTTCGAGTTCGAATGTCGAGCTTCCGAGCAGTTGCTCGATGGATAGCTTCTTTGATGAATTTCTGAAGGATACTCATGCTTGCACACATGCTCATACTTGCAACCCTCCTGGTCCTGATTATTCACATACGCACACCTGTTTTCATGTCCATACTAAAATTGTCTCTTCCCCCACCGAAGAAAAGGTTTCCACTGATGACACAGCGGAGTCTGTGGATAAAAAGAGTAAGAAACGCCCGCTAGGTAACCGCGAAGCAGTTCGTAAATACCGGGAGAAGAAAAAGGCGAGGGCTGCATCGTTGGAAGATGAAGTTGTGAGATTGAGGACCCTGAATCAGCAACTGTTGAAGAGATTGCAAGGTCAGGCTGCATTGGAGGCTGAGATTTCCAGGCTCAAGTGTTTGCTTGTGGATATTCGGGGAAGAATTGAAGGGGAGATTGGAACATTTCCATATCAGAAACCAGCCAATTCAAATCTGCCTAATCAAAATGTGCCTGGTAGTTACATGATGAATCCATGTAATGTGCAATGCAATGATCAGGCGTATTGCCTTCATGAAGGGGCCAATGGAAAAAGTGGAGAGAGCGGTATGTTGAATGGGCAAAGTTTTAGTGCGTGTGACTTTGAAAATCTTCAGTGCTTGGGAAATCAAAACACAGGAGCAAAGGAACTTCCTGACTGTGGATTTGGGGACACAATTTCTAACGTTAATTGCTCAGAATTAAATCAGAAGAAAGGTGTATATGAAAGACTCTGTCCAAGTTATGTGTTATAA 816 43.75 MEDGELESSNPEVFSSSNVELPSSCSMDSFFDEFLKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTAESVDKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRTLNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGTFPYQKPANSNLPNQNVPGSYMMNPCNVQCNDQAYCLHEGANGKSGESGMLNGQSFSACDFENLQCLGNQNTGAKELPDCGFGDTISNVNCSELNQKKGVYERLCPSYVL 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2667962 2669302 + Hsped.08g02940.1 Hepe08g0294 576266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0294 271 Gene3D - 74 152 - -
Hepe08g0294 271 CDD bZIP 90 143 - -
Hepe08g0294 271 SMART brlzneu 83 151 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g0294 271 MobiDBLite consensus disorder prediction 1 20 - -
Hepe08g0294 271 MobiDBLite consensus disorder prediction 71 96 - -
Hepe08g0294 271 FunFam Basic leucine zipper 24 74 152 - -
Hepe08g0294 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 133 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g0294 271 MobiDBLite consensus disorder prediction 76 96 - -
Hepe08g0294 271 Pfam Basic region leucine zipper 86 133 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g0294 271 Coils Coil 97 131 - -
Hepe08g0294 271 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 184 IPR031106 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER)
Hepe08g0294 271 SUPERFAMILY Leucine zipper domain 88 134 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0426 Hepe-Chr2:4083582 Hepe08g0294 Hepe-Chr8:2667962 2.79e-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56094 PF07716 bZIP_2 3.40E-15 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0294 K25785 - csv:101219501 481.87