Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0307 ATGTTCTCAGAGTTGATGAACTTTCTGAGAGCTTGTTTTCGACCGAGGTCGGATCGACATGTACACAAAGGTTCAGATGCTGGTGGTCGACAGGATGGTCTCCTATGGTACAAAGATAGTGGGCAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAACAATTTACTTGAGGATCAAAGCCAGATGGAGTCAGGCAATTTGAGCTTGCACGAGTCTGGGCCATATGGTACCTTTGTTGGTGTGTATGATGGCCATGGAGGGCCCGAGACATCTCGCTATGTAAATGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCGGTGGATGTCATACGGAAGGCATTTCAAGCTACTGAAGAGGGGGTCGTTGCTCAAGTCTCGAAACAATTTTTGATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTTGGTGTAATTTGTGGTGGTACCCTTTACATTGCTAACCTTGGTGATTCTCGAGCTGTTTTAGGGAGAGTTGTAAAGGCTACGGGGGAAGTTTTGTCCATTCAGTTGTCGGCCGAGCACAATGCAGCTATAGAGTCTGTGAGGCAGGAGCTCCGTGCCCTGCACCCTGATGACCCACATATTGTAGTTTTGAAGCATAATGTATGGCGCGTGAAGGGCCTTATACAGATTTCTCGATCAATCGGCGATGTCTATTTAAAGAAAGCTGAGTTCAACCGAGAGCCTCTTTATGCTAAGTTTCGCCTTCGTGAACCTATCAAAAAGCCCATACTGAGCGCCGAACCATCTATTTCAGTGCTCCAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAATCAGGAAGCTGTTGATGTTGTCCAAAACCATCCACGTAATGGAAGTGCAAGGAGGCTGGTGAAAGCAGCCCTGCAAGAGGCAGCAAAGAAGAGAGAAATGAGGTACTCCGATTTGAAGAAGATTGACCGTGGCGTACGGCGACATTTCCACGATGACATCACAGTGATTGTTGTGTTTCTCGACTCAAACCTCGTGAGCCGGGCTAGCTCTACAAAATGTGCAAGCCTATCTGTTCGAGGGGGCGGAGTTAACTTGCGTCCAAACTCATTGGCCCCTTGCACCACACCATCAGAGACTGGCATGGTCTGA 1194 47.4 MFSELMNFLRACFRPRSDRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHESGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGVVAQVSKQFLMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSIQLSAEHNAAIESVRQELRALHPDDPHIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPIKKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDVVQNHPRNGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSTKCASLSVRGGGVNLRPNSLAPCTTPSETGMV 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2764993 2768719 + Hsped.08g03070.1 Hepe08g0307 576279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0307 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Hepe08g0307 397 Pfam Protein phosphatase 2C 75 323 IPR001932 -
Hepe08g0307 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Hepe08g0307 397 CDD PP2Cc 48 355 IPR001932 -
Hepe08g0307 397 PANTHER PROTEIN PHOSPHATASE 39 354 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe08g0307 397 FunFam Phosphatase 2C family protein 36 365 - -
Hepe08g0307 397 SMART PP2C_4 39 353 IPR001932 -
Hepe08g0307 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
Hepe08g0307 397 Gene3D - 36 367 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0864 Hepe-Chr1:72746006 Hepe08g0307 Hepe-Chr8:2764993 4.82e-179 dispersed
Hepe05g0216 Hepe-Chr5:2604721 Hepe08g0307 Hepe-Chr8:2764993 2.05e-178 dispersed
Hepe08g0307 Hepe-Chr8:2764993 Hepe10g1335 Hepe-Chr10:49448469 4.50e-24 dispersed
Hepe02g0640 Hepe-Chr2:6678003 Hepe08g0307 Hepe-Chr8:2764993 2.14e-129 transposed
Hepe03g0040 Hepe-Chr3:478916 Hepe08g0307 Hepe-Chr8:2764993 7.58e-145 transposed
Hepe05g0524 Hepe-Chr5:7220977 Hepe08g0307 Hepe-Chr8:2764993 6.75e-141 transposed
Hepe02g0410 Hepe-Chr2:3911144 Hepe08g0307 Hepe-Chr8:2764993 6.20e-225 wgd
Hepe04g1630 Hepe-Chr4:71680648 Hepe08g0307 Hepe-Chr8:2764993 3.61e-226 wgd
Hepe06g0898 Hepe-Chr6:56257293 Hepe08g0307 Hepe-Chr8:2764993 3.42e-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0307 - - - 0.0