Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g0320 | ATGGATTTCTCTCTCAAATCTTTCAAGTATGCGAACAAACTTTCTGCAAAAGACTCTACTCAACATCAAGAACACCTCCCGATTCTCTCAGATCAGGAGCAACAATCCTCGATTATGGCCGTCTCCGATGCGTTATCTGACCGGAGAGAGGTCGTCGTCAAGGTCGATCAGCCCAATGCTGAGTCCGTGAACAGCAGTGGGGGGATTTGGCGGGAGTCGAGCTATGATTTCTGGAATGATAGTGATTGTAGGCGGAATCATGATCAGAATAATGGTGGTGGTAAGAGTGAGGATTTTGAGTTTAGGCAACTCCGGAAGGATGTGAAGGATGTGGAAGATCCGCCTTCCAAGCTCATTGGACAGTTTCTGCACAAGCAGAAGGCCTCGGGAGAGATGTCTTTGGATATGGATATGGAAATGTTGGAAGTGGAACTACCACAAGATAAGACTCTGCCTGCGGTGGCGGAATCTCCGATGCGACGGAGCTCGACGGAGTTGAAGGTCGCTTTCCAGTCCATTTCGGAGATTTCTGAAAACGATTCTATGCGAAGACGGCATAGGGACTCGCCGCCGGTCGATGAAGAATATAGAGGACAGCAAACGCACCACCGTGATCGTCGAGCTTATGGAAATAGTCACGATGGTGATGGTGATGGTGAGGTTGTGAGATGCACATCTAATTCGTCGTTTCAGAGGAAATCTAGCTTGCTTGGTGGGGCTAAACCTAAGTCCAGATTGCTTGGCCCTCTTGAACAGCCGGACCGGAGGTCAGGTCGTGTACCAAAATCAGGGCAAATGCGCTCGGGGTTGTTGTCAAAAGTCTTGGATGAAGAAGATGATGATCCATTCTTGGAAGAAGATCTTCCAGATGAGTACAAGAAGGCCAATCTTGGTGTTCTTACTCTGTTACAATGGGCGAGTTTGATTTTGATAATCGCGGCATTGATTTGCAGTTTGACGATTCGTTACTGGAGGGGAATGAAACTATGGAAGCTCGAGTTATGGAAATGGGAGGTAATGATTCTAGTTCTGATATGTGGAAGGTTGGTTTCTGGATGGGGGATTAGGATAATCGTCTTCTTCATCGAGAGAAGCTTTCTACTGCGTAAGAGAGTTCTCTACTTTGTCTATGGAGTTAGAAAGGCAGTTCAAAATTGTCTTTGGTTGGGACTTGTTTTAATTGCTTGGAACTTTCTGTTTGATGACAAAGTTCAAAGAGAAGTCAAGAGCAATGTCCTCGAGTATGTGACCAAAGTACTTGTATGCCTTTTAGTAAGCACTTTGGTTTGGCTTGTGAAAACTCTGATGGTGAAGGTTTTAGCTTCTTCTTTCCATGTGAGTACATATTTTGATAGGATTCAGGATGCACTGTTTAACCAATATGTAATTGAGACACTATCAGGACCGCCATTGATAGAGATTCAAAAGAATGAGGAAGAAGAAGAGAGACTTGCAGAAGAGGTAATGAAGTTACAAAATGCAGGGGCCACCATTCCTCCTGATCTAAAGGCAACTGCCTTTCCAACTCCAAAGGGTGGGGGAAGGGTGATTGGGAGTGGAGGGCTGCAGAAGAGTCCTCGTGGAAGAAGCGCCAAACTATCTCGGGCGCTATCGAAAAATGGCGAGGAGGGTATAACCATTGATCACTTGCATAAGCTTAGTCCTAAGAATGTGTCCGCTTGGAATATGAAGAGGTTGATGAACATGGTTCGACATGGAGTTCTTTCAACTTTGGATGAACGGATCAAGGATTCAACTCATGAGGATGAATCAGCCACACAGATCAAGAGTGAATATGAGGCAAAACTTGCTGCTAAGAAGATTTTTGAGAACGTGGCTAGGCATGGTTCCAAATACATCTACCTAGAGGACTTGATGCGTTTCGTGGCAGAAGATGAAGCTTCAAAAACCATGAGTCTTTTTGAAGGAGCATCTGAGAGCAGGAAAATAAGCAAATCATCCTTGAAAAACTGGGTGGTCAATGTCTTTAGAGAACGGAGGGCCCTAGCTTTGACACTGAATGATACGAAAACAGCTGTGAACCAACTTCACCGCATGGTGAATATTTTAGTTTCTGTTGTTATATTGGTTATTTGGCTACTGATTCTGGGTATAGCCACCAGCAAGTTTCTGTTATTTGTAACTTCTCAACTCTTCCTAGTCGCATTTGTATTTGGAAATACTTGCAAGACTGTTTTTGAAGCAATCATCTTCTTATTTGTGATGCATCCATTCGATGTTGGCGACCGATGTGAAATCGAGGGCGTGCAGATGATCGTAGAAGAAATGAATATTATGACGACCCTTTTTCTAAGATATGACAGCCAGAAAATCATAATTCCAAACAGTATTCTCGCAACCAAGGCCATCCAGAACTACTACCGCAGTCCCGACATGGGCGACGCCATAGAATTCTGTCTTCACATATCTACTCCGCCTGAGAAAATTGCTGTTATAAAACAGAGAATAGTAAGTTACATTGAGGGCAAGAACGAGCACTGGTATCCTGCTCCAAAAATTGTCATCAAGGATGTAGAAGAGTTGAATAGGATGAGATTAGCCATATGGCCTACTCATCGAATGAACCATCAAGACATGGGAGAGAGGTGGGCAAGGAGATCCCTTTTGGTCGAAGAACTGGTTAAAATTTTGCAAGAGCTCGACCTTCAACACCGTCTCCTACCGCTCGATATCAATGTTCGTTCCTTGCCTCCGGTGACCTCTACCAGGTTTCCAGCTACTTGGACAGCCACTGCATCGAGTGAGGCAGACAAGGAAATCAACCAATCGATGGATGGTACTCGCGGTTTGTAG | 2814 | 44.63 | MDFSLKSFKYANKLSAKDSTQHQEHLPILSDQEQQSSIMAVSDALSDRREVVVKVDQPNAESVNSSGGIWRESSYDFWNDSDCRRNHDQNNGGGKSEDFEFRQLRKDVKDVEDPPSKLIGQFLHKQKASGEMSLDMDMEMLEVELPQDKTLPAVAESPMRRSSTELKVAFQSISEISENDSMRRRHRDSPPVDEEYRGQQTHHRDRRAYGNSHDGDGDGEVVRCTSNSSFQRKSSLLGGAKPKSRLLGPLEQPDRRSGRVPKSGQMRSGLLSKVLDEEDDDPFLEEDLPDEYKKANLGVLTLLQWASLILIIAALICSLTIRYWRGMKLWKLELWKWEVMILVLICGRLVSGWGIRIIVFFIERSFLLRKRVLYFVYGVRKAVQNCLWLGLVLIAWNFLFDDKVQREVKSNVLEYVTKVLVCLLVSTLVWLVKTLMVKVLASSFHVSTYFDRIQDALFNQYVIETLSGPPLIEIQKNEEEEERLAEEVMKLQNAGATIPPDLKATAFPTPKGGGRVIGSGGLQKSPRGRSAKLSRALSKNGEEGITIDHLHKLSPKNVSAWNMKRLMNMVRHGVLSTLDERIKDSTHEDESATQIKSEYEAKLAAKKIFENVARHGSKYIYLEDLMRFVAEDEASKTMSLFEGASESRKISKSSLKNWVVNVFRERRALALTLNDTKTAVNQLHRMVNILVSVVILVIWLLILGIATSKFLLFVTSQLFLVAFVFGNTCKTVFEAIIFLFVMHPFDVGDRCEIEGVQMIVEEMNIMTTLFLRYDSQKIIIPNSILATKAIQNYYRSPDMGDAIEFCLHISTPPEKIAVIKQRIVSYIEGKNEHWYPAPKIVIKDVEELNRMRLAIWPTHRMNHQDMGERWARRSLLVEELVKILQELDLQHRLLPLDINVRSLPPVTSTRFPATWTATASSEADKEINQSMDGTRGL | 937 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 2865666 | 2870648 | - | Hsped.08g03200.1 | Hepe08g0320 | 576292 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g0320 | 937 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 19 | 917 | IPR016688 | GO:0005886(PANTHER)|GO:0006820(PANTHER)|GO:0008381(PANTHER) | |
| Hepe08g0320 | 937 | FunFam | Predicted mechanosensitive ion channel | 744 | 793 | - | - | |
| Hepe08g0320 | 937 | PIRSF | Memb_At2g17000 | 28 | 935 | IPR016688 | - | |
| Hepe08g0320 | 937 | MobiDBLite | consensus disorder prediction | 173 | 266 | - | - | |
| Hepe08g0320 | 937 | SUPERFAMILY | Sm-like ribonucleoproteins | 734 | 793 | IPR010920 | - | |
| Hepe08g0320 | 937 | MobiDBLite | consensus disorder prediction | 178 | 220 | - | - | |
| Hepe08g0320 | 937 | Coils | Coil | 474 | 497 | - | - | |
| Hepe08g0320 | 937 | MobiDBLite | consensus disorder prediction | 917 | 937 | - | - | |
| Hepe08g0320 | 937 | Gene3D | - | 744 | 793 | IPR023408 | - | |
| Hepe08g0320 | 937 | Pfam | Mechanosensitive ion channel, beta-domain | 737 | 794 | IPR006685 | GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe03g0405 | Hepe-Chr3:5803083 | Hepe08g0320 | Hepe-Chr8:2865666 | 1.66e-164 | transposed | |
| Hepe09g0905 | Hepe-Chr9:9063865 | Hepe08g0320 | Hepe-Chr8:2865666 | 2.10e-164 | transposed | |
| Hepe02g0399 | Hepe-Chr2:3826959 | Hepe08g0320 | Hepe-Chr8:2865666 | 1.28e-178 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g0320 | K22048 | - | csv:101210264 | 1414.44 |