Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0331 ATGGGTTGCGCCACTTCTAAGCTCGACGATCTCCCTGCGGTTTCCCTCTGTCGCGAGCGTTGCAATTTCCTCAACGAAGCGATTCGATATCGCCACGCATTTGCTGAGGCTCACGCGGCGTATATTCTGTCTCTTCAAGCTGTTGGGAAATCTCTGCACAGTTTTATTGAACCGGGTTTTGTTTCTTCTGACTTCCCTTCTGAGCCTAAGCTCAAACTTCCTCTTCAGAGAAAGGGCGACGCTGATCTTGAAGCTTCTAATTCCCCTCTTCATCGTTTATCTCACTCCAATTCCGGTTCTCACCTCCAATTACACTCCGATTCCGACGATGATTCCAGTACTCTTCACCATTCCGATCATTCTTCGCCTTTGCATCACACCCACGACGATTATTTTGACTTTAACACTGGGAATCGTGGCGGTGGTGGCGGCGGCGGCGGTGGTTATGTGCAGATGAATTATATGCAGAACAAAGCGATGCCGTCGGTGGTGCATCAGCAGGTGCCGGTTGGTTCAGAGAGGGTTTATCATATGGGTGAATCTTCTTCTTCCTCTGGTGTTTATCCTTATCCTTATTCGAATATGGATTCGAACCCTTATCCCAATAATGGGTATCCCAATTTTGGCGGTGGGTATGGCGGTGGGTATGGCGGTGGTGGTGGGTATTACGGTTCTTCGCCACCTCCTGCTTATGGTGGTATGCCGAATATGCTACCTCCGGCTTCGTCGTCGAAGCCACCACCGCCGCCACCCTCTCCGCCGAGAACCTCCGCTTGGGATTTCCTTAACTTCTTTGAGACTCCGGCGGTGGCGAACTACTATGGTGCCTACACGCCGGGAAGGGATCCGAGGGATGTGAGAAGGGAAGAGGGAATTCCCGAATTAGAAGATGTACGGTATCACCAACCGGAGGTTGTGAAGAAGGTTTACGGTGATCTTCAGAATTTTGCCGAGGACGGCGGCGGGAAGCACCCGAAGGCGGCGGTGGACGACCAATTGAGGGTAGTTAACAAGAATGTCACCGCCGCGGCTTATCAGACGAAGCCCGGCGCGGCGGTTGATGATGCAGTGCAACATGAGGTGAGAGTTGTTGATAAGAAGGTTGTGGATAAGGATAAGAAGCTGGACGACCATGGAAATGGAGCTCCTGCTGTTGCTGCAGCATTCAAAGGGGGAGCAGGTTCAAGGGATATTTATGAGGTTGTGAGAGAAATTGATGTTCTGTTCAAGAAAGCTTCAGAGTTTGGAGATGAAATTGCCAAGATGCTGGAGATGGGGCAGCTTCCTCATCAGCGTAAACATGCATTCTCAGCTCGACCACCCGCTTCACGGAGGAAAGCCAAGTCCTCTGCGAAGGCTGGTGTTGCTGAAGTCTTTTTCGTTGAGGATATGGGGATGAGATCTGGAAATCTTTCATCTACCCTGAAGAAGTTGTATATGTGGGAGAAAAAACTTTATAATGAAGTGAAGGGAGAGGAGAAGATGCGGCTGACCCATGACAGGAAGCGCCACCAGCTTAAACGTTTACACGAGAGAGGTGCTGAGGCCCAGAAAGTGGAGGCAACTCAAACATCCATAAATACCTTGTCGACAAACTTAAAAATTGCAATTCAGGTTGTTGATAAGATTTCTGAGACGATAAATAAGATTAGGGATGAAGAACTCTGGCCACAAGTGAATGAACTGATTCAAGGGTTAACCAGGATGTGGAAAGGTATGCTCGAATGCCATCATGCTCAGTATCAAGCAATTAAAGAATCGCGTGGTTTAGGCCATATTAGATCTGGCGGAAATCCTAGTGATCTCGATCTTCGGGTGACTTTGCAACTCGATCACGAGCTTATTAGCTGGACAACTAGATTTTCGGGTTGGATAAGTGCCCAGAAAAATTTTGTGAGATCCTTGAATAATTGGCTTCTGAAATGTCTTCTGTATGAGCCTGAAGAAACACCTGATGGAATCGTTCCTTTCTCACCCGGCAGGATTGGTGCACCACCCATTTTTGTAATCTGCAATCAGTGGTCACAAGGTCTGGACACATTCTCTGGGAACGAGGTAGTCGATTCTATGCACGTGTTTGCTAAGAGCGTGCTTCAAATATGGGAGCATGATAAGCAAGAAGTGCGTCAGACGATGGTAACGAACAAGGATCTCGAAAGGAAAGTAAAAAAAATTGACAGAGACGACCAAAAGTTGCAGAAAAAGATTCAGGCATTAGACAAGAAACTGATTCTGGTAACTGGACATGTGCAAGGAGATGGCACTAGCAATAGCAGCCTGCAGGCAGGTCTGCAATCCATTTTCGAGGCCCTTGAGAGGTTTGCATCCGACTCCATGAAAGCGTACGAGGAGCTTTTGCAACGAAGCGCCGAAGAAAGTGCCAAGACAAGAGCATGA 2397 48.27 MGCATSKLDDLPAVSLCRERCNFLNEAIRYRHAFAEAHAAYILSLQAVGKSLHSFIEPGFVSSDFPSEPKLKLPLQRKGDADLEASNSPLHRLSHSNSGSHLQLHSDSDDDSSTLHHSDHSSPLHHTHDDYFDFNTGNRGGGGGGGGGYVQMNYMQNKAMPSVVHQQVPVGSERVYHMGESSSSSGVYPYPYSNMDSNPYPNNGYPNFGGGYGGGYGGGGGYYGSSPPPAYGGMPNMLPPASSSKPPPPPPSPPRTSAWDFLNFFETPAVANYYGAYTPGRDPRDVRREEGIPELEDVRYHQPEVVKKVYGDLQNFAEDGGGKHPKAAVDDQLRVVNKNVTAAAYQTKPGAAVDDAVQHEVRVVDKKVVDKDKKLDDHGNGAPAVAAAFKGGAGSRDIYEVVREIDVLFKKASEFGDEIAKMLEMGQLPHQRKHAFSARPPASRRKAKSSAKAGVAEVFFVEDMGMRSGNLSSTLKKLYMWEKKLYNEVKGEEKMRLTHDRKRHQLKRLHERGAEAQKVEATQTSINTLSTNLKIAIQVVDKISETINKIRDEELWPQVNELIQGLTRMWKGMLECHHAQYQAIKESRGLGHIRSGGNPSDLDLRVTLQLDHELISWTTRFSGWISAQKNFVRSLNNWLLKCLLYEPEETPDGIVPFSPGRIGAPPIFVICNQWSQGLDTFSGNEVVDSMHVFAKSVLQIWEHDKQEVRQTMVTNKDLERKVKKIDRDDQKLQKKIQALDKKLILVTGHVQGDGTSNSSLQAGLQSIFEALERFASDSMKAYEELLQRSAEESAKTRA 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2969153 2974124 - Hsped.08g03310.1 Hepe08g0331 576303

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0331 798 Coils Coil 715 742 - -
Hepe08g0331 798 MobiDBLite consensus disorder prediction 89 103 - -
Hepe08g0331 798 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Hepe08g0331 798 PANTHER UNCHARACTERIZED 1 792 - -
Hepe08g0331 798 Pfam Protein of unknown function (DUF632) 399 697 IPR006867 -
Hepe08g0331 798 MobiDBLite consensus disorder prediction 86 139 - -
Hepe08g0331 798 MobiDBLite consensus disorder prediction 234 257 - -
Hepe08g0331 798 MobiDBLite consensus disorder prediction 234 256 - -
Hepe08g0331 798 MobiDBLite consensus disorder prediction 104 133 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0331 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2294 Hepe-Chr1:87524262 Hepe08g0331 Hepe-Chr8:2969153 3.21e-88 dispersed
Hepe08g0331 Hepe-Chr8:2969153 Hepe08g2109 Hepe-Chr8:59835385 9.06e-44 dispersed
Hepe02g0380 Hepe-Chr2:3581748 Hepe08g0331 Hepe-Chr8:2969153 1.96e-262 wgd
Hepe08g0331 Hepe-Chr8:2969153 Hepe08g1485 Hepe-Chr8:18405647 3.31e-69 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g242 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi10g00823 . . . Blo04g00600 . . . . . . . Sed01g0639 . . . . . . . . Bhi10g01233 Tan05g1068 Cmetu11g1383 . Hepe08g0331 . . . . . . . . . . . . Cme11g01221
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013043 0 1 0 0 0 1 2 1 1 1 0 1 2 1 1 2 1 0 2 1 1 1 1 1 1 1 1 2 1 0 28