Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0359 | ATGGATGACAAGCGAGGTATCAGCAGCAACAAGCCTGCCGACAAATGGATGGCATTTGACAGAGAATCAAACACTCCTGGAAACGAAGCAAAAGAAGACAGAAAAAGCTGGCAATCCTCTTCCAAAGGGGCAGTATCAACAGAAGCAATCATAGTAGAAAGGGCGGCGGAGTGGGGACTGGTGGTAGAGACAGACGTGGAAGAAGGCAGTTTCAAGGCCATCGTGGGGAGAGCATCAGGGGAAGGAGGGGGCAGCAAAATGTCATCAGAGAAAATCAGCGACGGAGGAAGAACTTCTAGCTTTAGCAATGAAACCTCTAGAGTTTTTCCAAGGGTATCACAAGAGTTGAAGGATGCTTTGGCTTCTTTGGAACAGACATTTGTAGTCTCTGATGCCACCAAACCAGACTGCCCCATCGTCTATGCCAGCAGTGGGTTCTTTGGCATGACTGGTTATGCTTCAGAGGAGGTCATTGGAAAGAACTGCCGTTTTCTTCAGGGACCAGAGACGGACCAGAAAGAAGTTGACAAAATTCGATATGCAGTGAAAAACGGCAAAAGCTACTGCGGGAGGCTCTTGAACTACAAGAAGAACGGCACTCCTTTCTGGAATCTTCTGACAGTCACGCCTATCAAGGATGACAACGGCAATACTATCAAATTTATTGGAATGCAGGTAGAAGTAAGCAAGTACACAGAAGGCATAAATGATAGAGCATTACGACCAAACGGGTTGCCAAAGTCATTAATCCGCTATGATGCTCGCCAGAAGGAAAAGGCAAAGGATTCCATCACAGAGGTTGTTCAAACTGTGAAGCATCCTAAATCTCATAATCGAGCTATGAGTCATGACACTACCAGGAAAAAAGAAGAGTTGGAGAAGTTCAATCTTGACTATATTCTTCCAAAGTCAGTTGAAGCTGCAAATGATACACCAGGTAGACAAACTCCTCAACAGGACCTCAGAGATGATGGCTTAGGCAAGAAACCTAGGTTATCAAGTCGAGTTTCTTTAATGGGGTTCAAAGGGAAATCTCTAAGCAGTTCAAGAAAGCTTGAATCCACAGCCTTCGAACCAGAAATTTTGATGACTGATGAAGTAGAACGGACTGATAGTTGGGACCGTTCTGAAATAGAAAGGGATGTTCGCCAAGGAATTGATTTAGCTACTACATTGGAACGCATTGAGAAAAATTTTGTCATTACTGATCCAAGGCTTCCTGATAATCCAATTATATTTGCATCCGACAGCTTTCTTGAATTGACAGAATATACACGTGAAGAAATTTTGGGACGAAACTGTCGGTTTCTTCAAGGACCTGAAACAGATCAGGAAACTGTCTCAAAGATAAGGGATGCAATTAGGGAACAAAGAGAAATCACTGTTCAGTTGATCAACTATACCAAGACTGGTAAAAAGTTCTGGAATTTATTCCATTTGCAACCAATGCGTGATGAAACGGGAGAGCTTCAGTATTTTATCGGTGTACAACTAGATGGAAGTGGTCATGTGGAACCTTTGCAAAACCGCCTTTCTGAGACAGCAGAGCTGCAAAGTGCCAAGCTGGTTAAAGCCACTGCAGAGAATGTTGATGAGGCTGTCCGTGAACTTCCTGATGCCAACTTGAAACCAGAAGATTTGTGGGCAATTCATTCTCAACCAGTCTACCCAAGGCCTCACAAGAAGCATAATTCTTCTTGGACTGCTATACAAAAGATTATTCGACGTGGTGAAAAAATTGGACTCCAACATTTTAAGCCAATTCAACCACTGGGTTGTGGAGACACTGGCAGTGTTCATCTGGTGGAACTTCTAGGTACAAGTGAACTTTATGCCTTGAAAGCAATGGAGAAATCAGCACTGTTGAATCGAAACAAGGTCCACAGAGCATGCATTGAAAGGCAAATCATTGCGCTTCTGGATCATCCTTTTCTTCCAACACTATACACTTCATTTCAGACCCCTACACACGTTTGCTTGATAACAGACTTTTGCTCTGGTGGAGAGTTATTCGCATTGCTTGATAAGCAGCCAATGAAAATGTTTAAAGAGGATTCTGCAAGGTTCTATGCTGCAGAGGTCGTCATTGGCTTGGAATATCTTCACTGTCTAGGAATCATTTATCGGGATCTGAAACCTGAAAATATTCTTCTCCAGAAGGATGGGCATGTTACGCTTGCTGACTTCGATTTATCACTCGTGACATCCTGCAAACCGCAGATTGTGAAGTATCCATTGCCTCAAGGTAGAAGGAGATCTCGAAGTCAACCACCGCCAGTATTTGTTGCAGAGCCGACAACGCAATCAAATTCATTTGTTGGAACTGAAGAGTATATTGCTCCTGAAATTATAACCGGGGAAGGCCACAGCAGCTCTATCGATTGGTGGGCTCTTGGTATCTTGTTGTATGAGATGCTTTATGGTCGCACGCCTTTCAGGGGAAAGAACAGGCAGAAGACTTTTGGTAACATCTTGCACAAAGATCTCACCTTCCCAAGTAGCATTCAGGTAAGTCTTGCAGCAAGGCAGTTGATCAATGCATTGCTACAAAGAGACCCGACCAGGCGCTTAGGATCAAGTACAGGTGCAAATGAAATCAAACAGCACCCCTTTTTCCAATCAATCAACTGGCCGCTGATCCGGTGTATGGTCCCACCACCATTAGAATCACCTCTTCAGCTTACTGGGAAAGATGGAACATCCAAGAACGTAAACTGGGAAGATGATGGGGTGCTTGGTGCAATGGATATGGATTTTTTCTGA | 2763 | 43.87 | MDDKRGISSNKPADKWMAFDRESNTPGNEAKEDRKSWQSSSKGAVSTEAIIVERAAEWGLVVETDVEEGSFKAIVGRASGEGGGSKMSSEKISDGGRTSSFSNETSRVFPRVSQELKDALASLEQTFVVSDATKPDCPIVYASSGFFGMTGYASEEVIGKNCRFLQGPETDQKEVDKIRYAVKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDNGNTIKFIGMQVEVSKYTEGINDRALRPNGLPKSLIRYDARQKEKAKDSITEVVQTVKHPKSHNRAMSHDTTRKKEELEKFNLDYILPKSVEAANDTPGRQTPQQDLRDDGLGKKPRLSSRVSLMGFKGKSLSSSRKLESTAFEPEILMTDEVERTDSWDRSEIERDVRQGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQETVSKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDETGELQYFIGVQLDGSGHVEPLQNRLSETAELQSAKLVKATAENVDEAVRELPDANLKPEDLWAIHSQPVYPRPHKKHNSSWTAIQKIIRRGEKIGLQHFKPIQPLGCGDTGSVHLVELLGTSELYALKAMEKSALLNRNKVHRACIERQIIALLDHPFLPTLYTSFQTPTHVCLITDFCSGGELFALLDKQPMKMFKEDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVTLADFDLSLVTSCKPQIVKYPLPQGRRRSRSQPPPVFVAEPTTQSNSFVGTEEYIAPEIITGEGHSSSIDWWALGILLYEMLYGRTPFRGKNRQKTFGNILHKDLTFPSSIQVSLAARQLINALLQRDPTRRLGSSTGANEIKQHPFFQSINWPLIRCMVPPPLESPLQLTGKDGTSKNVNWEDDGVLGAMDMDFF | 920 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3219992 | 3236136 | - | Hsped.08g03590.1 | Hepe08g0359 | 576331 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0359 | 920 | Gene3D | PAS domain | 373 | 537 | - | - | |
Hepe08g0359 | 920 | ProSiteProfiles | Protein kinase domain profile. | 585 | 872 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0359 | 920 | Gene3D | Phosphorylase Kinase; domain 1 | 584 | 668 | - | - | |
Hepe08g0359 | 920 | MobiDBLite | consensus disorder prediction | 306 | 331 | - | - | |
Hepe08g0359 | 920 | CDD | PAS | 399 | 499 | IPR000014 | - | |
Hepe08g0359 | 920 | Gene3D | PAS domain | 126 | 294 | - | - | |
Hepe08g0359 | 920 | FunFam | LOV domain-containing protein | 373 | 537 | - | - | |
Hepe08g0359 | 920 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 706 | 718 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe08g0359 | 920 | SMART | serkin_6 | 585 | 872 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0359 | 920 | FunFam | LOV domain-containing protein | 584 | 668 | - | - | |
Hepe08g0359 | 920 | Gene3D | Transferase(Phosphotransferase) domain 1 | 669 | 890 | - | - | |
Hepe08g0359 | 920 | SUPERFAMILY | Protein kinase-like (PK-like) | 561 | 895 | IPR011009 | - | |
Hepe08g0359 | 920 | ProSiteProfiles | PAS repeat profile. | 384 | 457 | IPR000014 | - | |
Hepe08g0359 | 920 | ProSiteProfiles | PAS repeat profile. | 112 | 185 | IPR000014 | - | |
Hepe08g0359 | 920 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Hepe08g0359 | 920 | FunFam | Putative LOV domain-containing protein | 126 | 282 | - | - | |
Hepe08g0359 | 920 | ProSiteProfiles | PAC domain profile. | 458 | 512 | IPR000700 | - | |
Hepe08g0359 | 920 | ProSiteProfiles | PAC domain profile. | 186 | 240 | IPR000700 | - | |
Hepe08g0359 | 920 | PANTHER | FLIPPASE KINASE 1-RELATED | 534 | 891 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Hepe08g0359 | 920 | NCBIfam | PAS domain S-box protein | 138 | 229 | IPR000014 | - | |
Hepe08g0359 | 920 | NCBIfam | PAS domain S-box protein | 409 | 499 | IPR000014 | - | |
Hepe08g0359 | 920 | SMART | pac_2 | 461 | 503 | IPR001610 | - | |
Hepe08g0359 | 920 | SMART | pac_2 | 189 | 231 | IPR001610 | - | |
Hepe08g0359 | 920 | CDD | STKc_phototropin_like | 583 | 891 | - | - | |
Hepe08g0359 | 920 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Hepe08g0359 | 920 | MobiDBLite | consensus disorder prediction | 77 | 104 | - | - | |
Hepe08g0359 | 920 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 400 | 499 | IPR035965 | - | |
Hepe08g0359 | 920 | ProSitePatterns | Protein kinases ATP-binding region signature. | 591 | 614 | IPR017441 | GO:0005524(InterPro) | |
Hepe08g0359 | 920 | CDD | PAS | 139 | 228 | IPR000014 | - | |
Hepe08g0359 | 920 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 133 | 225 | IPR035965 | - | |
Hepe08g0359 | 920 | Pfam | PAS domain | 133 | 229 | IPR000014 | - | |
Hepe08g0359 | 920 | Pfam | PAS domain | 407 | 499 | IPR000014 | - | |
Hepe08g0359 | 920 | SMART | pas_2 | 114 | 183 | IPR000014 | - | |
Hepe08g0359 | 920 | SMART | pas_2 | 386 | 455 | IPR000014 | - | |
Hepe08g0359 | 920 | FunFam | Putative LOV domain-containing protein | 669 | 884 | - | - | |
Hepe08g0359 | 920 | Pfam | Protein kinase domain | 588 | 872 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g0359 | Hepe-Chr8:3219992 | Hepe08g2554 | Hepe-Chr8:67162861 | 1.22e-94 | dispersed | |
Hepe01g1071 | Hepe-Chr1:75489427 | Hepe08g0359 | Hepe-Chr8:3219992 | 1.13e-51 | transposed | |
Hepe08g0842 | Hepe-Chr8:7607966 | Hepe08g0359 | Hepe-Chr8:3219992 | 0.0 | transposed | |
Hepe08g2122 | Hepe-Chr8:60135387 | Hepe08g0359 | Hepe-Chr8:3219992 | 2.44e-19 | transposed | |
Hepe10g1713 | Hepe-Chr10:53858706 | Hepe08g0359 | Hepe-Chr8:3219992 | 6.25e-57 | transposed | |
Hepe02g0334 | Hepe-Chr2:3193228 | Hepe08g0359 | Hepe-Chr8:3219992 | 0.0 | wgd | |
Hepe04g1697 | Hepe-Chr4:72109626 | Hepe08g0359 | Hepe-Chr8:3219992 | 5.58e-105 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73022 | PF00069 | Pkinase | 6.40E-62 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0359 | K20715 | - | csv:101215355 | 1708.35 |