Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0368 | ATGGGATCATTAGGCGAGAAAACAATACTGGAATTTGAAGACGAGAGCCTTAAACTTGGTTACAGTAACATGAAGAACAGGGTATTTAACAGCATTAAGATTGTCGTCTTCTCCGCTAAAATCAACTTTCTCATGCCTTTTGGACCTTTAACAATATTAGTCAGCAATTTATCTGGTCACCATGGTTGGGTCTTCCTTTTAAGCTTGTTGGGGATCATACCTCTTGCTGAGCGTTTGGGCTATGCAACTGAACAACTGGCATGCTATACTGGAGCCACAGTTGGAGGTCTTTTGAATGCTACGTTTGGAAATGCCACAGAATTGATAATATCAATATATGCATTGCGAAGAGGAATGATACGTGTCGTTCAACAGTCATTATTAGGTTCAATTTTGTCTAATATGTTATTAGTACTTGGATGTGCCTTCTTTGCTGGTGGAGTTGTGGTTCCTAAGAGGGAGCAGGTCTTCAGTAAGGCAGCTGCTACATTGAATTCTGGATTGCTGTTAATGGCAGTAATGGGACTTCTATTTCCTGCTGTCCTTCGTTCCACACATACAGAGTTGCACTCTGGAAAGTCAGAGTTGGCTCTTTCAAGATTTAGTAGCGGCATTATGTTGGTGGCATATGCTGCCTATCTTGTTTTTCAGTTGAAAAGCGAAAGGAACTTATATCAACCGGTCGATGATCAGGCGTCCACTGAAGAGAATTCTGATGATGAAGAAGCTCCTGAGATTTCAATGTGGGAATCCATTATTTGGCTGTCTATCTTGACCATCTGGATCTCCGTCCTCTCCGAATACTTAGTTAATGCGATAGAGGGGGCATCGATTGCCATGAACATACCGGTAGCATTCATCAGTGTTATCCTACTACCAATTGTTGGGAATGCTGCAGAGCATGCAGGTGCCATCATGTTTGCTATGAAAGACAAGCTTGACATTTCTTTGGGAGTCGCAATAGGATCGTCTACACAAATATCTATGTTTGGGATTCCTTTTTGTGTGGTCATTGGTTGGATCATGGGATGCCCTATGGACTTGAATTTTCAACTCTTCGAGACCGCCACGCTTTTCATCACTGTTATAGTTGTGGCCTTCATGTTGCAGGATGGAACTTCTAATTATCTCAAAGGACTGATGCTTATTCTCTGCTACCTGATAGTAGCGGCAAGTTTCTTTGTACATATTGATCCAGCTTCAGTTGGTAAGCTTTCACTCCCTTTGGGGCCCTACAAAACTGTTGACAGTCTTAACTTAAATATCAAAACTTTTACACAGATGATCAGACCCGAAAACCCGGTCAATGAAAGGCAAGGGACGACTCGGAGTAGTGAATCTGCCTGCAGAGGGGCCTCTTCAACCTAA | 1368 | 42.47 | MGSLGEKTILEFEDESLKLGYSNMKNRVFNSIKIVVFSAKINFLMPFGPLTILVSNLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGVVVPKREQVFSKAAATLNSGLLLMAVMGLLFPAVLRSTHTELHSGKSELALSRFSSGIMLVAYAAYLVFQLKSERNLYQPVDDQASTEENSDDEEAPEISMWESIIWLSILTIWISVLSEYLVNAIEGASIAMNIPVAFISVILLPIVGNAAEHAGAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGCPMDLNFQLFETATLFITVIVVAFMLQDGTSNYLKGLMLILCYLIVAASFFVHIDPASVGKLSLPLGPYKTVDSLNLNIKTFTQMIRPENPVNERQGTTRSSESACRGASST | 455 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3303315 | 3309674 | - | Hsped.08g03680.1 | Hepe08g0368 | 576340 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0368 | 455 | Pfam | Sodium/calcium exchanger protein | 62 | 218 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe08g0368 | 455 | Pfam | Sodium/calcium exchanger protein | 251 | 393 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe08g0368 | 455 | FunFam | Vacuolar cation/proton exchanger | 239 | 395 | - | - | |
Hepe08g0368 | 455 | Gene3D | - | 238 | 395 | IPR044880 | - | |
Hepe08g0368 | 455 | Gene3D | - | 91 | 231 | IPR044880 | - | |
Hepe08g0368 | 455 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 22 | 399 | IPR004713 | GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER) | |
Hepe08g0368 | 455 | FunFam | Vacuolar cation/proton exchanger | 92 | 231 | - | - | |
Hepe08g0368 | 455 | NCBIfam | calcium/proton exchanger | 45 | 394 | IPR004798 | GO:0006816(InterPro)|GO:0015369(InterPro) | |
Hepe08g0368 | 455 | MobiDBLite | consensus disorder prediction | 433 | 455 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1586 | Hepe-Chr2:21052748 | Hepe08g0368 | Hepe-Chr8:3303315 | 8.89e-189 | dispersed | |
Hepe06g0649 | Hepe-Chr6:49068851 | Hepe08g0368 | Hepe-Chr8:3303315 | 2.22e-195 | dispersed | |
Hepe08g0368 | Hepe-Chr8:3303315 | Hepe10g1320 | Hepe-Chr10:49113599 | 1.40e-68 | dispersed | |
Hepe08g0368 | Hepe-Chr8:3303315 | Hepe04g0753 | Hepe-Chr4:61536010 | 1.32e-107 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0368 | K07300 | - | csv:101215915 | 714.916 |