Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0373 | ATGGGTCTCTCCAGCCTCCCTGCCCCTTCCGAAGGAGTATTAGGTTTGATCCTTGTAAATACAGCCCTATCAATTTCCATCTTCAAAGGCATAGTTCGGTCGATCCTCCACGTCGTTGGCATCCATCTCTCGTCACCTGCGTCACCAGATTCCATGGAGAATGCTCCTGAATCCATAGAATTCCGTCATAACCCAAATGGAAGTTACATCGAAGAGTTCCGTAGTCGGATCCCAGCGATTCTGTTCGATAAGGTTCGTAGCTGCAAACGGCTCGAACAGGACTGCTCTGTCTGCCTGACCCAATTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTTTTCCATAGTGTGTGCTTGGAGAAGTGGCTGGACTACTGGAACCTTACGTGCCCACTGTGTCGAACTCCATTAATGCCCGAAGAAGAGACAGCTTCCTGCTTCTGGTGA | 456 | 48.68 | MGLSSLPAPSEGVLGLILVNTALSISIFKGIVRSILHVVGIHLSSPASPDSMENAPESIEFRHNPNGSYIEEFRSRIPAILFDKVRSCKRLEQDCSVCLTQFEPESEINHLSCGHLFHSVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW | 151 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3353296 | 3355065 | + | Hsped.08g03730.1 | Hepe08g0373 | 576345 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0373 | 151 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 58 | 142 | IPR013083 | - | |
Hepe08g0373 | 151 | SUPERFAMILY | RING/U-box | 94 | 143 | - | - | |
Hepe08g0373 | 151 | PANTHER | - | 1 | 151 | IPR044249 | - | |
Hepe08g0373 | 151 | ProSiteProfiles | Zinc finger RING-type profile. | 95 | 137 | IPR001841 | - | |
Hepe08g0373 | 151 | SMART | ring_2 | 95 | 136 | IPR001841 | - | |
Hepe08g0373 | 151 | Pfam | Ring finger domain | 94 | 137 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0577 | Hepe-Chr3:11369784 | Hepe08g0373 | Hepe-Chr8:3353296 | 1.71e-15 | dispersed | |
Hepe02g0325 | Hepe-Chr2:3102759 | Hepe08g0373 | Hepe-Chr8:3353296 | 1.86e-70 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0373 | K16285 | - | csv:101216645 | 294.664 |