Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0381 | ATGGCGGATTCCGATAACGATTCGGGAGGTCAGAACAACAACGCGATCTGCGAGATGTCGCCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATAATGAAGAAGGCGCTACCGGCGAACGCCAAGATCTCGAAAGATGCTAAAGAAACGGTACAAGAATGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGATAAGTGCCAGAGAGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTGTGGGCGATGACGACGCTCGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACCGAGAAATGGAAGGGGAAAAGAGTATCGGGAGACAGGTGGAGAAAGACGGTGGTGGGCCCAGCGGCAGTGGTAGTGGTGGAGGAGTCAACCCTGGTAGTGGTGGTGGTGGTGGCGCCGCCGGCGGATATAGCGGAATGAGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGTGGTGGTGGTGGAGGTGGAGGAGGATATCACCACATGGGATTTGGCGGCGGGAGGGGAGGAGGTGGTAGTTCCGGCACCGGTCACCGGTAG | 615 | 55.12 | MADSDNDSGGQNNNAICEMSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSIGRQVEKDGGGPSGSGSGGGVNPGSGGGGGAAGGYSGMSGMYGGMMMMGHHQGGVYGGGGGGGGGYHHMGFGGGRGGGGSSGTGHR | 204 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3406020 | 3407395 | - | Hsped.08g03810.1 | Hepe08g0381 | 576353 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0381 | 204 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 13 | 127 | IPR027113 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0001228(InterPro)|GO:0006355(InterPro)|GO:0006357(PANTHER)|GO:0016602(InterPro)|GO:0016602(PANTHER) | |
Hepe08g0381 | 204 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 58 | 74 | IPR003956 | GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe08g0381 | 204 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 27 | 91 | IPR003958 | - | |
Hepe08g0381 | 204 | FunFam | Nuclear transcription factor Y subunit B-3 | 17 | 135 | - | - | |
Hepe08g0381 | 204 | PRINTS | CCAAT-binding transcription factor subunit A signature | 74 | 92 | - | - | |
Hepe08g0381 | 204 | PRINTS | CCAAT-binding transcription factor subunit A signature | 55 | 73 | - | - | |
Hepe08g0381 | 204 | PRINTS | CCAAT-binding transcription factor subunit A signature | 93 | 111 | - | - | |
Hepe08g0381 | 204 | SUPERFAMILY | Histone-fold | 24 | 118 | IPR009072 | GO:0046982(InterPro) | |
Hepe08g0381 | 204 | Gene3D | Histone, subunit A | 15 | 132 | IPR009072 | GO:0046982(InterPro) | |
Hepe08g0381 | 204 | MobiDBLite | consensus disorder prediction | 117 | 143 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0881 | Hepe-Chr1:72932981 | Hepe08g0381 | Hepe-Chr8:3406020 | 5.09e-52 | dispersed | |
Hepe06g0593 | Hepe-Chr6:43822035 | Hepe08g0381 | Hepe-Chr8:3406020 | 7.30e-42 | dispersed | |
Hepe06g0594 | Hepe-Chr6:43833629 | Hepe08g0381 | Hepe-Chr8:3406020 | 7.53e-42 | dispersed | |
Hepe06g0617 | Hepe-Chr6:45893488 | Hepe08g0381 | Hepe-Chr8:3406020 | 3.54e-56 | dispersed | |
Hepe08g0381 | Hepe-Chr8:3406020 | Hepe05g0232 | Hepe-Chr5:2736226 | 4.97e-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56099 | PF00808 | CBFD_NFYB_HMF | 2.00E-27 | CL0012 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0381 | K08065 | - | csv:101219076 | 224.942 |