Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0381 ATGGCGGATTCCGATAACGATTCGGGAGGTCAGAACAACAACGCGATCTGCGAGATGTCGCCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATAATGAAGAAGGCGCTACCGGCGAACGCCAAGATCTCGAAAGATGCTAAAGAAACGGTACAAGAATGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGATAAGTGCCAGAGAGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTGTGGGCGATGACGACGCTCGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACCGAGAAATGGAAGGGGAAAAGAGTATCGGGAGACAGGTGGAGAAAGACGGTGGTGGGCCCAGCGGCAGTGGTAGTGGTGGAGGAGTCAACCCTGGTAGTGGTGGTGGTGGTGGCGCCGCCGGCGGATATAGCGGAATGAGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGTGGTGGTGGTGGAGGTGGAGGAGGATATCACCACATGGGATTTGGCGGCGGGAGGGGAGGAGGTGGTAGTTCCGGCACCGGTCACCGGTAG 615 55.12 MADSDNDSGGQNNNAICEMSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSIGRQVEKDGGGPSGSGSGGGVNPGSGGGGGAAGGYSGMSGMYGGMMMMGHHQGGVYGGGGGGGGGYHHMGFGGGRGGGGSSGTGHR 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3406020 3407395 - Hsped.08g03810.1 Hepe08g0381 576353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0381 204 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 127 IPR027113 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0001228(InterPro)|GO:0006355(InterPro)|GO:0006357(PANTHER)|GO:0016602(InterPro)|GO:0016602(PANTHER)
Hepe08g0381 204 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0381 204 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
Hepe08g0381 204 FunFam Nuclear transcription factor Y subunit B-3 17 135 - -
Hepe08g0381 204 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Hepe08g0381 204 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Hepe08g0381 204 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Hepe08g0381 204 SUPERFAMILY Histone-fold 24 118 IPR009072 GO:0046982(InterPro)
Hepe08g0381 204 Gene3D Histone, subunit A 15 132 IPR009072 GO:0046982(InterPro)
Hepe08g0381 204 MobiDBLite consensus disorder prediction 117 143 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0881 Hepe-Chr1:72932981 Hepe08g0381 Hepe-Chr8:3406020 5.09e-52 dispersed
Hepe06g0593 Hepe-Chr6:43822035 Hepe08g0381 Hepe-Chr8:3406020 7.30e-42 dispersed
Hepe06g0594 Hepe-Chr6:43833629 Hepe08g0381 Hepe-Chr8:3406020 7.53e-42 dispersed
Hepe06g0617 Hepe-Chr6:45893488 Hepe08g0381 Hepe-Chr8:3406020 3.54e-56 dispersed
Hepe08g0381 Hepe-Chr8:3406020 Hepe05g0232 Hepe-Chr5:2736226 4.97e-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56099 PF00808 CBFD_NFYB_HMF 2.00E-27 CL0012 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0381 K08065 - csv:101219076 224.942