Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0477 ATGAAAATGGGGCAGCTTACTTCTTTGGTGTTGGCCACTATAGTTGGTCTTCTAGGCCTGATAGGCTCCACTCAAGCTCAGTTGCAGAATGGTTTCTATGCCAAAACCTGCCCAAACGCTGAGAAGATTGTGCTAGATTTCGTTCACCAGCATATCCACAATGCCCCTTCGTTGGCAGCAACTTTCATTAGAATGCACTTCCATGATTGCTTTGTCAGGGGTTGTGATGCATCTGTGCTTATAAATTCCACCTCAAATAACCAAGCTGAGAAGGATTCTCCACCAAATCGAACACTCAGAGGCTTTGACTTCCTTGACAGAGTCAAAAGCTTACTTGAAGCTGAATGCCCTGGAATTGTCTCTTGTGCAGATGTTCTTTCCTTGGTTGCAAGAGATACCATTTTCGCCACAGGAGGTCCTCACTGGGAAGTTCCCACGGGCCGAAGGGATGGAGTGATCTCAAATACAACAGAAGCCTTGAATAACATTCCTCCTCCATTTGGAAACTTTTCAACACTCCAAACCCTTTTCGGAAACCAAGGCCTTGATCTAAAAGACTTGGTATTGCTATCAGGCGCGCACACAATCGGTATAGCACATTGCTCGTCACTCTCAAACCGACTCTACAATTTCACCGGCGTGGGTGACCAAGATCCCTCTCTCGACCCAAGATACGCCGCTAATCTCAAAGCCAACAAATGCAAAAGTCCGACCGACAACAGCAAAGTGGAAATGGACCCTGGAAGTCGCAACACTTTTGATCTTAGCTACTACTCACTTCTTCTGAAACGAAGGGGTCTCTTCGAATCCGATGCTGCTCTCACTACAGACGCAACTACATTGGGTCTAGTTCAGAAACTGGTTGAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCAATGGAGAAAATGGGTCGGATTAAAGTGAAGACTGGAACTGAAGGTGAAATCAGAAGGAGATGCGCTGTGGTGAATAGTTAA 987 45.9 MKMGQLTSLVLATIVGLLGLIGSTQAQLQNGFYAKTCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINSTSNNQAEKDSPPNRTLRGFDFLDRVKSLLEAECPGIVSCADVLSLVARDTIFATGGPHWEVPTGRRDGVISNTTEALNNIPPPFGNFSTLQTLFGNQGLDLKDLVLLSGAHTIGIAHCSSLSNRLYNFTGVGDQDPSLDPRYAANLKANKCKSPTDNSKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDATTLGLVQKLVEGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRRCAVVNS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4193591 4194894 + Hsped.08g04770.1 Hepe08g0477 576449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0477 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0477 328 Gene3D - 32 327 - -
Hepe08g0477 328 PANTHER PEROXIDASE 25-RELATED 23 323 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Hepe08g0477 328 Pfam Peroxidase 46 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 FunFam Peroxidase 31 179 - -
Hepe08g0477 328 FunFam Peroxidase 164 306 - -
Hepe08g0477 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Hepe08g0477 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 Gene3D Peroxidase, domain 2 164 306 - -
Hepe08g0477 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0477 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1801 Hepe-Chr3:74952135 Hepe08g0477 Hepe-Chr8:4193591 2.04e-76 dispersed
Hepe03g1802 Hepe-Chr3:74958242 Hepe08g0477 Hepe-Chr8:4193591 1.21e-77 dispersed
Hepe07g0201 Hepe-Chr7:1774637 Hepe08g0477 Hepe-Chr8:4193591 1.33e-87 dispersed
Hepe08g0477 Hepe-Chr8:4193591 Hepe10g0176 Hepe-Chr10:1784585 9.38e-87 dispersed
Hepe02g0021 Hepe-Chr2:337575 Hepe08g0477 Hepe-Chr8:4193591 9.47e-69 transposed
Hepe02g0777 Hepe-Chr2:8590401 Hepe08g0477 Hepe-Chr8:4193591 2.56e-70 transposed
Hepe03g0137 Hepe-Chr3:1655227 Hepe08g0477 Hepe-Chr8:4193591 1.08e-104 transposed
Hepe02g0183 Hepe-Chr2:1906315 Hepe08g0477 Hepe-Chr8:4193591 1.76e-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0477 K00430 - csv:101213629 583.563