Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0498 ATGGAAAACAAAGAGAGTAGCAGTTCTCACCGTTTCATGATCTCCAATTTATGCATCTTGTTTTTAGTATTAATTTCATCCTCCGCAGTCGACAGTGTCGATATACTAAGAGATGCTAACGGAGATTCGGTTGTTTCGGAGGGAGGAAGATTCGAACTTGGTTTTTTCACTCCAGACGGAATCTCCGACATAAGAAGATACGTCGGAATATGGTTTCACGGTTCGAAACCGCGGATCGTTGTGTGGGTTGCCAATAGAAACCAACCACTATCCAACAATAATGGAATTTTCGCCATCAGAGATGGCAACCTCAAGGTATTAGCATCGACCAACACTTCTTTATGGTCCACAACCCTCCAATTCTCTTCTGACAATAACACAACAATGGTGCTGATGGATTCTGGGAATTTAATCCTCAAGGAATCAGGCGTCAACAGCACGACCCTCTGGCAAAGCTTCCAAAATCCAACTGACACATTTCTTTCGGGCATGATCATGACCGAGGACTTGAAGTTGACTTCTTGGAAAAGTTCAGATGATCCATCGCCTGGGAATTTCACGTTTCTGAAGGATGCGGGAGGCCGCTACATCATCGAGAGACTTAGTGCACCGTATTGGGTCAACAAGGAACTATGGCAAAATTTCTCCACCGAAACCGATGGAGTGATTGGTGAAGTAATAGACTTACTGTCAACAATTGGTGATGGTGACTTGAAGGCCAACAATTATACCGTTCGTTTTCAGAATCAAGAGCTAGATTACAACTATACAAGAGCAGTTATGGATTTCAGCGGGAAAATAGAGTACCTTGCAAGAAACAGAGTGGGTGGAAAATGGGATGCCATCTGGTCGGAACCGGAAAACATATGTAGTGTGGTATCAGCTTGTGGGGCTTTCGCTAGTTGTCGGAGTGACAGTAAACACACTTGCAGGTGCTTGCCTGGGTTTGAGCCAAAGTCCAAGGATGAATGGGATTCCGGTGATTACTCAAATGGGTGCCAGAGAAAAACAGAAATTTGCATCAAAGAAGTGGCGCAGGCTGGAGATTTCTTGACAATTAATATGAAGGTAAGAAAGACGACTAATATCGTGAAGGCTGATAATAATAAGAGTTGCAGAACCAAGTGTCTTGAATCTTGTACATGTCAGGCGTTTTCAGAAGTAACAACAATTAATAGAACCGACAGTACTGTCGCATGTGTCATTTGGGACGATGAACTCCAAAACATTTGGGAATATGCAGATGGTGGTGGTTTTGTTAACATCCGTATTAAACGTTCTGACATTGGTATTTTTTTCAATTCCAACTCCTCTATGTATGTTTGTCTTCTCCAACTGCCTTCTAATCTACTTTGGCATGTTTGGCTGTTTTCTTCAGAATTGACACAGCTCGATTGCAAAACATGTGGAACCAACATCGTCCCTTATCCTCTGAGTCTGAGAACAGAATTCGACTGCGGTGATCCTGCATATCGCAATTTCACTTGTAAAGTTTCCACAGGCCAGGTTCTCTTTCAACCAGCAGCTGGAGTTTACTACAATGTTACCTACATAGATCCACAGCTAAATACTTTTACCATTACAACAAACGGGTCTATTTGCAGAGGTAATGATACGGATGCAATTCAAAAGCTACTGAAATTGGAACACTCGTCTACATTTAAAGTAAGTAGCAGTTGTGACTCTGAATTTAATGAAATTGATATTCAATGGGTGAAACCATTAGAGCCTATCTGCAATTCACCAAAAGATTGCACCAATTGGCCAAATTCATTATGCAACTCATCAACGGATGGAACAAACAGATGCTTGTGCAATCCTTCTTTAGAGTGGAATGGCACTGGCTGTAGTATTCTTCCAGAGGTTCGTTTGAATGAACCACATCCAAAGAAGAGAAATTTCAGAGTTGGTGTCATTGTCCCAGTGACCATTGCTGGATTGATTGTTATTTCCTGCTTGTTGTTGTTTATTTACTACAAAAGAAGCAAGGTTCAAAATAAAAAAGAGAAAAGAACAAGTTTTTGGGGAAATCAGCTGGAAACTACTCACTTGTATGAAAATGAGAAACGTGTTAGAGATTTTATGGGTTCCGGAATGTTTGGAGAAGATGATAGAAAAGCCATTGAAGTACCAGTTTTTGATTTGGAAACCATTCTCAGTGCTACAGACAACTTCTCTGAAGCAAACGAAATTGGACGAGGAGGATTTGGGACAGTTTACAAGGGACTTTTTCCAGGAGGACTGGAAATTGCAATAAAGAGGTTGTCAAAAGGTTCCGCCCAAGGAGTAGATGAGTTTAAGAATGAGGCAATTCTCATCGCCAAACTTCAGCATCGAAATCTAGTTAGACTCTTGGGCTATTGTGTTGCAGGAGAAGAAAAAATGTTGGTGTATGAATATATGCCCAACAAAAGCTTAGACTATTTTATATTTGATCGAACACAATGTTTATTGGTGAACTGGGAGATGCGATTCAATATCATAGTGGGAATTGGTCGAGGGTTAGTTTATCTGCACGAAGATTCAAGGTTGAGGATTATTCATAGAGATATGAAAACAAGCAATGTTCTATTGGATGCAGAAATGAATCCAAAAATAGCAGACTTTGGTTTAGCAAGAATCTTTGATGGGAAGCAAACAGAGGCAATCACCAACAGAGTTGTTGGAACTTATGGGTACATGTCACCAGAATATGCATTGGATGGATCATTCTCGTTCAAATCTGACGTGTTCAGTTTTGGTATAGTTGTGTTGGAGATTGTGAGTGGAAGAAGGAACACTGGGTTCTACCAGTCGAAAGAAGCTTTGAATCTTCTTGGATACGTATGGAAGTTGTGGAGAGAAAAAAGAGCATTGGAAATAGCAGAGGTGGGCGTACGAGAAAGCTGCAATCCAAATGAAGTTATAAAATGTGTGGCTGTCGGGTTGCTGTGTGTGCAAGAAGACCCCAACGATCGTCCAACAATGTCGAATGTAGCCTTTATGCTAAGCTCCGGCAGTGACCCTGCTTCTCTTCCAGATCCTAAACAGCCGGCTTTCGTTGATAAAAATCCAACTCCTCCAACTTCTTCTGCAACTTCTTCTTCGGGCTTTAAGCAAGAAACTATTGTAAGTAATGATTGTAGCTTGCTTGAGCCTCGTTAA 3144 41.22 MENKESSSSHRFMISNLCILFLVLISSSAVDSVDILRDANGDSVVSEGGRFELGFFTPDGISDIRRYVGIWFHGSKPRIVVWVANRNQPLSNNNGIFAIRDGNLKVLASTNTSLWSTTLQFSSDNNTTMVLMDSGNLILKESGVNSTTLWQSFQNPTDTFLSGMIMTEDLKLTSWKSSDDPSPGNFTFLKDAGGRYIIERLSAPYWVNKELWQNFSTETDGVIGEVIDLLSTIGDGDLKANNYTVRFQNQELDYNYTRAVMDFSGKIEYLARNRVGGKWDAIWSEPENICSVVSACGAFASCRSDSKHTCRCLPGFEPKSKDEWDSGDYSNGCQRKTEICIKEVAQAGDFLTINMKVRKTTNIVKADNNKSCRTKCLESCTCQAFSEVTTINRTDSTVACVIWDDELQNIWEYADGGGFVNIRIKRSDIGIFFNSNSSMYVCLLQLPSNLLWHVWLFSSELTQLDCKTCGTNIVPYPLSLRTEFDCGDPAYRNFTCKVSTGQVLFQPAAGVYYNVTYIDPQLNTFTITTNGSICRGNDTDAIQKLLKLEHSSTFKVSSSCDSEFNEIDIQWVKPLEPICNSPKDCTNWPNSLCNSSTDGTNRCLCNPSLEWNGTGCSILPEVRLNEPHPKKRNFRVGVIVPVTIAGLIVISCLLLFIYYKRSKVQNKKEKRTSFWGNQLETTHLYENEKRVRDFMGSGMFGEDDRKAIEVPVFDLETILSATDNFSEANEIGRGGFGTVYKGLFPGGLEIAIKRLSKGSAQGVDEFKNEAILIAKLQHRNLVRLLGYCVAGEEKMLVYEYMPNKSLDYFIFDRTQCLLVNWEMRFNIIVGIGRGLVYLHEDSRLRIIHRDMKTSNVLLDAEMNPKIADFGLARIFDGKQTEAITNRVVGTYGYMSPEYALDGSFSFKSDVFSFGIVVLEIVSGRRNTGFYQSKEALNLLGYVWKLWREKRALEIAEVGVRESCNPNEVIKCVAVGLLCVQEDPNDRPTMSNVAFMLSSGSDPASLPDPKQPAFVDKNPTPPTSSATSSSGFKQETIVSNDCSLLEPR 1047
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4359002 4362672 - Hsped.08g04980.1 Hepe08g0498 576470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0498 1047 Gene3D Phosphorylase Kinase; domain 1 698 800 - -
Hepe08g0498 1047 SMART serkin_6 725 995 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0498 1047 CDD B_lectin 40 156 IPR001480 -
Hepe08g0498 1047 SMART blect_4 35 156 IPR001480 -
Hepe08g0498 1047 Pfam Protein tyrosine and serine/threonine kinase 729 993 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0498 1047 MobiDBLite consensus disorder prediction 999 1033 - -
Hepe08g0498 1047 Pfam PAN-like domain 353 409 IPR003609 -
Hepe08g0498 1047 CDD STKc_IRAK 731 996 - -
Hepe08g0498 1047 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 29 1011 - -
Hepe08g0498 1047 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Hepe08g0498 1047 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 690 800 - -
Hepe08g0498 1047 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0498 1047 Pfam D-mannose binding lectin 80 172 IPR001480 -
Hepe08g0498 1047 SUPERFAMILY Protein kinase-like (PK-like) 710 1021 IPR011009 -
Hepe08g0498 1047 ProSiteProfiles PAN/Apple domain profile. 340 427 IPR003609 -
Hepe08g0498 1047 Gene3D Transferase(Phosphotransferase) domain 1 801 1004 - -
Hepe08g0498 1047 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 801 1004 - -
Hepe08g0498 1047 ProSitePatterns Protein kinases ATP-binding region signature. 731 753 IPR017441 GO:0005524(InterPro)
Hepe08g0498 1047 ProSiteProfiles Protein kinase domain profile. 725 1013 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0498 1047 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 181 IPR036426 -
Hepe08g0498 1047 Pfam S-locus glycoprotein domain 244 320 IPR000858 GO:0048544(InterPro)
Hepe08g0498 1047 Gene3D - 37 154 IPR036426 -
Hepe08g0498 1047 MobiDBLite consensus disorder prediction 1016 1033 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1978 Hepe-Chr7:63767820 Hepe08g0498 Hepe-Chr8:4359002 8.76e-127 dispersed
Hepe07g2389 Hepe-Chr7:68230461 Hepe08g0498 Hepe-Chr8:4359002 2.09e-89 dispersed
Hepe08g0498 Hepe-Chr8:4359002 Hepe08g2482 Hepe-Chr8:65909238 4.51e-94 dispersed
Hepe08g0498 Hepe-Chr8:4359002 Hepe08g0499 Hepe-Chr8:4373578 0.0 tandem
Hepe01g1334 Hepe-Chr1:78518100 Hepe08g0498 Hepe-Chr8:4359002 8.11e-123 wgd
Hepe02g0205 Hepe-Chr2:2073744 Hepe08g0498 Hepe-Chr8:4359002 1.56e-201 wgd
Hepe04g1802 Hepe-Chr4:72967135 Hepe08g0498 Hepe-Chr8:4359002 1.78e-51 wgd
Hepe07g1971 Hepe-Chr7:63673465 Hepe08g0498 Hepe-Chr8:4359002 6.18e-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73025 PF07714 PK_Tyr_Ser-Thr 1.30E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0498 - - - 0.0