Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0499 ATGGGAAACAAGAAGGCAGAGGAGTGTAGTACTCTTTTGGTCTTCAGTTTATGCATCTTCTTTTCTTTGCTGTCTGCCAGAGGCGCCGTCGTCAATACATTAAGAGACAGTGATGGAGATTCTGTTGTTTCGGAGGGAGGAGGATTCCAACTTGGTTTTTTCACTCCTCACGACGACGCTAGTAGAAGAAGATACGTCGGAATATGGTACCACGGCTCCCAACCGGAGGTGGTTGTATGGGTTGCCAACAGAAACAAACCACTATACAACAACAATGGAACTTTCGCCATTACAAAAGACGGCAACCTCAAGGTATTGGCATCAGACGGCACTTCTTTATGGTCCACCACCCTCCAATTCTCTTCTCACAATAACACAACAATGGTGCTGATGGATTCTGGGAATTTAATCCTCAAGGAATCAGGCGTCAACGGCACGACTCTCTGGCAAAGCTTCCAAAATCCAACTGACACATTTCTTTCGGGCATGATCATGACCGAGGACTTGAAGTTGACTTCTTGGAAAAGTTCAGATGATCCATCGCCTGGGAATTTCACGTTTCTGAAGGATGCGGGAGGCCGCTACATCATCGAGAGACTTAGTGCACCGTATTGGGTCAACAAGGAACTATGGCAAAATTTCTCCACCGAAACCGATGGAGTGATTGGTGAAGTAATAGACTTACTGTCAACAATTGGTGATGGTGACTTGAAGGCCAACAATTATACCGTTCGTTTTCAGAATCAAGAGCTAGATTACAACTATACAAGAGCAGTTATGGATTTCAGCGGGAAAATAGAGTACCTTGCAAGAAACAGAGTGGGTGGAAAATGGGATGCCATCTGGTCGGAACCGGAAAACATATGTAGTGTGGTATCAGCTTGTGGGGCCTTCGCTAGTTGTCGGAGTGACAGTAAACACACTTGCAGGTGCTTGCCTGGGTTTGAGCCAAAGTCCAAGGATGAATGGGATTCCGGTGATTACTCAAATGGGTGCCAGAGAAAAACAGAAATTTGCATCAAAGAAGTGGCGCAGGCTGGAGATTTCTTGACAATTAATATGAAGGTAAGAAAGACGTCTAATATCGTGAAGGCTGATAATAATAAGAGTTGCAGAACCAAGTGTCTTGAATCTTGTACATGTCAGGCGTTTTCAGAAGTAACAACAATTAATAGAACCGACAGTACTGTCGCATGTGTCATTTGGGACGATTTACTCCAAAACATTTGGGAATATGCAGATGGTGGTGGTTTTGTTAACATCCGTATTAAACGTTCTGACATTGGTATTTTTTTCAATTCCAATTCCTCTATGTATGTTTGTCTTCTCCAACTGCCTTCTAATCTACTTTGCCATGTTTGGCTGTTTTCTTCAGAATTGACACAGCTCGATTGTAAAACATGTGGAACCAACATCGTTCCTTATCCTCTGAGAACAGAATTCGACTGCGGTGATCCTGCATATCGCAATTTCACTTGTAAAGTTTCCACTGGCCAGGTTCGCTTTCAACCAGCAGCTGGAGTTTACTACAATGTTACCTACATAGATCCACAGCTAAATACTTTTACCATTACAACAAACGGGTCTATTTGCAGAGGTGATACGGATGCAATTCAAAAGCTACTGAAATTGGAACACTCGTCTACATTCAAAGTAAGTAGCAGTTGTGACTCTGAATTTAATGAAATTGATATTCAATGGGAGAAACCATTAGAGCCTATCTGCAATCCACCAAAAGATTGCACCAATTGGCCAAATTCATTATGCAACTCATCAACGGATGGAACAAAGAGATGCTTGTGCAATCCTTCTTTAGAGTGGAATGGCACTGGCTGTAGTATTCTTCCAGAGGTTCGTTTGAATGAACCACATCCAAAGAAGAGAAATTTCAGAGTTGGTGTCATTGTCCCAGTGACCATTGCTGGATTGATTGTTATTTCCTGCTTCTTGTTGTATATTTACTACAAAAGAAGGAAGGTTCAAAATAAAAAAGAGAAAAGAACAAGTTTTTGGGGAAATCAGCTGGAAACTACTCACTTGTATGAAAATGAGAAACGTGTTAGAGACTTTATGGGTTCCGGAATGTTTGGAGAAGATGATAGAAAAGCCATTGAAGTACCAGTTTTTGATTTGGAAACCATTCTCAGTGCTACAGACAACTTCGCTGAAGCAAACAAAATTGGACGAGGAGGATTTGGGACAGTTTACAAGGGACTTTTTCCAGGAGGACTGGAAATTGCAATAAAGAGGCTGTCGAAAGGTTCCGCCCAAGGAGTAGATGAGTTTAAGAATGAGGCAATTCTCATCGCCAAACTTCAGCATCGAAATCTAGTTAGACTCTTGGGCTATTGTATTGCAGGAGAAGAGAAAATGTTGGTGTATGAATATATGCCCAACAAAAGCTTAGACTATTTTGTATTTGATCAAACACAATGTTTATTGGTGAACTGGGAGATGCGGCTTAATATCATAGTGGGAATTGTTAGAGGGCTAGTTTATCTCCATGAAGATTCAAGATTGAGGATTATTCATAGAGATATGAAAACAAGCAATGTTCTGTTAGATGCAGAAATGAATCCTAAAATTTCTGACTTTGGTTTAGCAAGAATCGTTGATGGCAATCAAACAGAGGCAATCACCAACAGAGTTGTTGGAACCTATGGGTACATGTCACCAGAATATGCATTGGATGGATCATTCTCGTTCAAATCCGACGTGTTCAGTTTTGGTATAGTTGTGTTGGAGATTGTGAGTGGAAGAAGGAACACTGGGTTCTACCAGTCGAAAGAAGCTTTGAATCTTCTTGGATACGTATGGAAGTTGTGGAGAGAAAAAAGAGCATTGGAAATAGCAGAGGTGGGCGTACGAGAAAGCTGCAATCCAAATGAAGTTATAAAATGTGTGGCTGTCGGGTTGCTGTGTGTGCAAGAAGACCCCAACGATCGTCCCACGATGTCGAATGTAGCTTTTATGCTAAGCTCCGGCAGCGACCCTGCTTCTCTTCCAGATCCTAAACGGCCGGCTTTCGTTGATCAAAAATCAACTCCTGCTTCTGCAACTTCTTCGTCGGGCTTTAAGCAAGAAATTGTAACCAATGATTGTACCTTACTTGAGCCTCGTTAA 3123 41.88 MGNKKAEECSTLLVFSLCIFFSLLSARGAVVNTLRDSDGDSVVSEGGGFQLGFFTPHDDASRRRYVGIWYHGSQPEVVVWVANRNKPLYNNNGTFAITKDGNLKVLASDGTSLWSTTLQFSSHNNTTMVLMDSGNLILKESGVNGTTLWQSFQNPTDTFLSGMIMTEDLKLTSWKSSDDPSPGNFTFLKDAGGRYIIERLSAPYWVNKELWQNFSTETDGVIGEVIDLLSTIGDGDLKANNYTVRFQNQELDYNYTRAVMDFSGKIEYLARNRVGGKWDAIWSEPENICSVVSACGAFASCRSDSKHTCRCLPGFEPKSKDEWDSGDYSNGCQRKTEICIKEVAQAGDFLTINMKVRKTSNIVKADNNKSCRTKCLESCTCQAFSEVTTINRTDSTVACVIWDDLLQNIWEYADGGGFVNIRIKRSDIGIFFNSNSSMYVCLLQLPSNLLCHVWLFSSELTQLDCKTCGTNIVPYPLRTEFDCGDPAYRNFTCKVSTGQVRFQPAAGVYYNVTYIDPQLNTFTITTNGSICRGDTDAIQKLLKLEHSSTFKVSSSCDSEFNEIDIQWEKPLEPICNPPKDCTNWPNSLCNSSTDGTKRCLCNPSLEWNGTGCSILPEVRLNEPHPKKRNFRVGVIVPVTIAGLIVISCFLLYIYYKRRKVQNKKEKRTSFWGNQLETTHLYENEKRVRDFMGSGMFGEDDRKAIEVPVFDLETILSATDNFAEANKIGRGGFGTVYKGLFPGGLEIAIKRLSKGSAQGVDEFKNEAILIAKLQHRNLVRLLGYCIAGEEKMLVYEYMPNKSLDYFVFDQTQCLLVNWEMRLNIIVGIVRGLVYLHEDSRLRIIHRDMKTSNVLLDAEMNPKISDFGLARIVDGNQTEAITNRVVGTYGYMSPEYALDGSFSFKSDVFSFGIVVLEIVSGRRNTGFYQSKEALNLLGYVWKLWREKRALEIAEVGVRESCNPNEVIKCVAVGLLCVQEDPNDRPTMSNVAFMLSSGSDPASLPDPKRPAFVDQKSTPASATSSSGFKQEIVTNDCTLLEPR 1040
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4373578 4378200 - Hsped.08g04990.1 Hepe08g0499 576471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0499 1040 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 180 IPR036426 -
Hepe08g0499 1040 CDD B_lectin 37 155 IPR001480 -
Hepe08g0499 1040 SMART blect_4 33 155 IPR001480 -
Hepe08g0499 1040 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 26 1006 - -
Hepe08g0499 1040 CDD STKc_IRAK 727 992 - -
Hepe08g0499 1040 Gene3D - 32 153 IPR036426 -
Hepe08g0499 1040 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0499 1040 Pfam S-locus glycoprotein domain 243 319 IPR000858 GO:0048544(InterPro)
Hepe08g0499 1040 SUPERFAMILY Protein kinase-like (PK-like) 706 1003 IPR011009 -
Hepe08g0499 1040 Gene3D Transferase(Phosphotransferase) domain 1 797 1000 - -
Hepe08g0499 1040 MobiDBLite consensus disorder prediction 996 1025 - -
Hepe08g0499 1040 Pfam D-mannose binding lectin 78 171 IPR001480 -
Hepe08g0499 1040 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 797 1000 - -
Hepe08g0499 1040 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 686 796 - -
Hepe08g0499 1040 Pfam Protein tyrosine and serine/threonine kinase 725 989 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0499 1040 SMART serkin_6 721 991 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0499 1040 ProSiteProfiles Bulb-type lectin domain profile. 27 151 IPR001480 -
Hepe08g0499 1040 Gene3D Phosphorylase Kinase; domain 1 694 796 - -
Hepe08g0499 1040 Pfam PAN-like domain 353 407 IPR003609 -
Hepe08g0499 1040 ProSitePatterns Protein kinases ATP-binding region signature. 727 749 IPR017441 GO:0005524(InterPro)
Hepe08g0499 1040 ProSiteProfiles Protein kinase domain profile. 721 1009 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0499 1040 ProSiteProfiles PAN/Apple domain profile. 339 426 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0205 Hepe-Chr2:2073744 Hepe08g0499 Hepe-Chr8:4373578 1.15e-202 dispersed
Hepe07g1975 Hepe-Chr7:63744851 Hepe08g0499 Hepe-Chr8:4373578 5.55e-46 dispersed
Hepe07g2001 Hepe-Chr7:64065652 Hepe08g0499 Hepe-Chr8:4373578 8.82e-65 dispersed
Hepe07g2002 Hepe-Chr7:64117856 Hepe08g0499 Hepe-Chr8:4373578 4.82e-94 dispersed
Hepe08g0499 Hepe-Chr8:4373578 Hepe08g2482 Hepe-Chr8:65909238 4.16e-95 dispersed
Hepe08g0498 Hepe-Chr8:4359002 Hepe08g0499 Hepe-Chr8:4373578 0.0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73026 PF07714 PK_Tyr_Ser-Thr 5.20E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0499 - - - 0.0