Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0522 ATGGGGAGCTGTTTGTCTACTCGCAATCAGAGTAGTTGCAATGGTGGAAGGAATGGAGTGAGAGTTTCTGGATCCTGTTTGGGGATTGAACTTCGTGGCCGGATTGAAAGAAAGAGAACATTCTCAGATCATATTTTTTCTCTGCAGCATTTGAAATCTATACCTAATAGACTTGTTTATAATGGGAAGACTCGAAATTCTTGCATTTTCACTCAGCAGGGTCGAAAGGGTATAAACCAGGATGCCATGGTTGTATGGGAAGACTTCATATCAGATGGTGCAATTTTCTGTGGGATATTTGATGGTCACGGCCCACACGGTCATGTCGTTGCACGAAAGGTTAGAGATGTTCTGCCAAGAAAGCTAGCGTCATTCTGGCAGTCATCTCAGTTGGAACATAATAGATCAGATAGAACTTCTTGTCTCTGGTGGAGTCGAAAGAATTCAGCAGATGGTGAAGCACAGGACATAGATGGTTCACAAGAGGATAAAACAAGTTCTTTATGGAGAACAGGTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAATCTCATCCCAAAGTTGACTGTTTCTGTAGTGGCAGTACCGCGGTCACTCTAGTAAAGCAGGGCTCGGATCTGTTCGTGGGAAGTATTGGGGATTCTCGAGCAATTCTTGGATCTAAAGACAGCAGTGATTCCCTTATAGCAACTCAATTGACAGTAGATCTAAAGCCTGATTTGCCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTGTTTGCATTGCAAGATGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAACGCGCCTGGATTAGCCATGGCTCGAGCATTTGGTGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATTCCTGAGTTCTCACACCGTGTGCTTACAGATAATGATCTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTGGTTGAGATAGTGTGTTCTGCCTCAACTCGGTCATCGGCAGCTCGAATGGTAGTAGACTCGGCTGCTCGTGAGTGGAAGCTTAAGTACCCTACTTCAAAAATGGATGACTGTGCAGTCGTTTGCCTATTCTTGGATGGGAAAATGGATTCAGAATCAGAAAATGAAGAACAAACTTCTTCTGCAACTCTTGAAACCAATCAAATGGTTAACACTGCAGATTCAGAGGAAGAGCAGAGGTCTGAGCCAAGTCTGCAAAGGAATTATACAGTCCGTTCGTCGGAAGAAAAAGACCAAATTGGAGGGTTATCTTCACATGGTGTAGAGAATGGAGAATCAATGTCTGCTGAAGATGAGAATTGGTTGGGACTGGAGGGTGTAACAAGAGTAAACTCTCTGGTTCAACTCCCTAGATTTTCTTGA 1407 43.78 MGSCLSTRNQSSCNGGRNGVRVSGSCLGIELRGRIERKRTFSDHIFSLQHLKSIPNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGIFDGHGPHGHVVARKVRDVLPRKLASFWQSSQLEHNRSDRTSCLWWSRKNSADGEAQDIDGSQEDKTSSLWRTGFLKSYKAMDKELKSHPKVDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSLIATQLTVDLKPDLPREAERIKKCKGRVFALQDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTDNDLFVVLASDGVWDVLSNEEVVEIVCSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESENEEQTSSATLETNQMVNTADSEEEQRSEPSLQRNYTVRSSEEKDQIGGLSSHGVENGESMSAEDENWLGLEGVTRVNSLVQLPRFS 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4577549 4580488 - Hsped.08g05220.1 Hepe08g0522 576494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0522 468 MobiDBLite consensus disorder prediction 384 402 - -
Hepe08g0522 468 SMART PP2C_4 55 371 IPR001932 -
Hepe08g0522 468 CDD PP2Cc 72 373 IPR001932 -
Hepe08g0522 468 MobiDBLite consensus disorder prediction 412 439 - -
Hepe08g0522 468 PANTHER PROTEIN PHOSPHATASE 67 372 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe08g0522 468 SUPERFAMILY PP2C-like 61 375 IPR036457 -
Hepe08g0522 468 Gene3D - 56 375 IPR036457 -
Hepe08g0522 468 ProSiteProfiles PPM-type phosphatase domain profile. 66 373 IPR001932 -
Hepe08g0522 468 MobiDBLite consensus disorder prediction 380 447 - -
Hepe08g0522 468 FunFam probable protein phosphatase 2C 52 57 376 - -
Hepe08g0522 468 Pfam Protein phosphatase 2C 156 350 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0147 Hepe-Chr3:1782620 Hepe08g0522 Hepe-Chr8:4577549 1.44e-24 dispersed
Hepe08g0522 Hepe-Chr8:4577549 Hepe08g1761 Hepe-Chr8:34251428 2.28e-140 dispersed
Hepe02g0152 Hepe-Chr2:1671125 Hepe08g0522 Hepe-Chr8:4577549 8.80e-229 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0522 - - - 0.0