Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0544 | ATGGGCTGCATCTGTTCTAAGGTTTTAGTGGATGGGTGTAGTAATCATGAACATGATAGCTCCAAAAGAGCATATTCCTCCAGAAAACACCTCTCTGAATTGAAGATTTCGAGAGCTGGCTCTCCAAAATCGGAGCAGATTTGGGGAAAAGATAGACTGGTCTGTGGTGATCTTAAGGTTATGTTGTTTGATACGAAGGCGAATGGTGACCCTCCTAATGAGAGGAAGAAAACTGAGATCCCTGATGTCACCATTTTCAATCAACCATGTATGGGAAGGATTCCGAAGGCTACCGAGGCCGAGCAGGTTGCTGCTGGGTGGCCGAGTTGGCTGGCTGGGGTGGCTGGTGAGGCTATCAAAGGATGGTTGCCAAAACGTACAAATAACTTCATCAAGTTAGAAAAAATTGGCCAGGGAACTTACAGCAGTGTGTATAAAGCTCGTGATATAATTCAAGATAAAGTTGTGGCCTTGAAAAAGGTCAGGTTCGACAATCAAGATACCGAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGCGAAGGCTTGATCATCCAAATATAATTAAGTTGGAAGGTTTGATCACATCACAAACATCATGTACCATGTACCTTGTTTTTGAATATATGGAACATGATCTTACAGGGCTTGCATCACGGCCTGGCACGTCGTTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCACTGTCACAGTAATGGGGTTCTGCATCGAGACATAAAGGGCTCAAATCTTCTTATTGACAACAACGGCATTTTGAAGATAGCAGATTTTGGGTTGTCTGTTCTCTTTGATTCTCAGTCTACGGTTCCCATGACGAGTCGTGTAATAACTCTCTGGTATCGACCACCAGAACTTTTACTTGGAGCATCTCAATATGGAGCTAAAGTTGATTTATGGAGCGCTGGTTGCATTCTAGGAGAGTTATACGCGGGCAAGCCTGTCTTGCCAGGAAAAACAGAGGTTGAACAACTGCATAAAATATTCAAGCTATGTGGTTCCCCCTCCAAGGAATATTGGAGCAAATTGCATTTGAAGCATTCAACAAGCATGACGCCTCCACAGTCGTACGAAAGATGTCTTCGAGAAATATTTAACGATTTTCCTCGTGCTGCTGTTGATCTTATGGACACTTTGCTGTCTATAGATCCTGCAGGGCGAGGAACCGCGGCTTCTGCACTCAACAGTGAGTTTTTTACTACAAGGCCCTTACCATGCGATCCTTCAAGTTTGCCAAAATACCCTCCCAGCAAAGAGATTGATTCAAAAATGCGCGAAGAGGAAGCAAGAAGGCAACGAGGAATAGGTGGTGGAAGAAGCCGAACAATTGACTCAGAAGGAAAAGGACTGAAGCAATCTCGGGTAGTTCCTACAGCAAAGGCCAATGCTGACTTGGTTATATCACTACTGAGAAAACAAAGTCATTCGATCTCAAAGTACCAGAGTGAAACATGTTCTTACGGTTTGGTGTCAAAAAGAACCTCAAATTCAGGACCTATAACTCGAGGACCAAGATTTGCAAACTCAAAAAAGGACCCTAAAAGCGTTTCTACGATTCCGTGCGCGTATTTAACATCATCTGGTCCTATTGAATTTGTTTCTTACAAACACGTCCGTGAAAGAAATGGAGTTTCAAGGCAGAATCATTGA | 1695 | 43.24 | MGCICSKVLVDGCSNHEHDSSKRAYSSRKHLSELKISRAGSPKSEQIWGKDRLVCGDLKVMLFDTKANGDPPNERKKTEIPDVTIFNQPCMGRIPKATEAEQVAAGWPSWLAGVAGEAIKGWLPKRTNNFIKLEKIGQGTYSSVYKARDIIQDKVVALKKVRFDNQDTESIKFMAREILVLRRLDHPNIIKLEGLITSQTSCTMYLVFEYMEHDLTGLASRPGTSFTEPQMKCYMKQLLSGLDHCHSNGVLHRDIKGSNLLIDNNGILKIADFGLSVLFDSQSTVPMTSRVITLWYRPPELLLGASQYGAKVDLWSAGCILGELYAGKPVLPGKTEVEQLHKIFKLCGSPSKEYWSKLHLKHSTSMTPPQSYERCLREIFNDFPRAAVDLMDTLLSIDPAGRGTAASALNSEFFTTRPLPCDPSSLPKYPPSKEIDSKMREEEARRQRGIGGGRSRTIDSEGKGLKQSRVVPTAKANADLVISLLRKQSHSISKYQSETCSYGLVSKRTSNSGPITRGPRFANSKKDPKSVSTIPCAYLTSSGPIEFVSYKHVRERNGVSRQNH | 564 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 4752757 | 4755473 | + | Hsped.08g05440.1 | Hepe08g0544 | 576516 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0544 | 564 | SUPERFAMILY | Protein kinase-like (PK-like) | 124 | 422 | IPR011009 | - | |
Hepe08g0544 | 564 | Gene3D | Phosphorylase Kinase; domain 1 | 117 | 212 | - | - | |
Hepe08g0544 | 564 | FunFam | probable serine/threonine-protein kinase At1g54610 | 117 | 212 | - | - | |
Hepe08g0544 | 564 | Pfam | Protein kinase domain | 132 | 414 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0544 | 564 | PANTHER | CELL DIVISION PROTEIN KINASE | 130 | 414 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Hepe08g0544 | 564 | MobiDBLite | consensus disorder prediction | 421 | 440 | - | - | |
Hepe08g0544 | 564 | SMART | serkin_6 | 130 | 414 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0544 | 564 | FunFam | probable serine/threonine-protein kinase At1g54610 | 213 | 454 | - | - | |
Hepe08g0544 | 564 | CDD | STKc_CDK9_like | 130 | 414 | - | - | |
Hepe08g0544 | 564 | MobiDBLite | consensus disorder prediction | 445 | 468 | - | - | |
Hepe08g0544 | 564 | ProSitePatterns | Protein kinases ATP-binding region signature. | 136 | 159 | IPR017441 | GO:0005524(InterPro) | |
Hepe08g0544 | 564 | Gene3D | Transferase(Phosphotransferase) domain 1 | 213 | 451 | - | - | |
Hepe08g0544 | 564 | ProSiteProfiles | Protein kinase domain profile. | 130 | 414 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0544 | 564 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 250 | 262 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g0544 | Hepe-Chr8:4752757 | Hepe08g2381 | Hepe-Chr8:64277137 | 4.55e-180 | dispersed | |
Hepe08g0544 | Hepe-Chr8:4752757 | Hepe08g0545 | Hepe-Chr8:4760355 | 2.14e-195 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73027 | PF00069 | Pkinase | 5.30E-69 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0544 | - | - | - | 0.0 |