Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0545 ATGGGTTGCCCATGTTCCAAGCCTTCTGCTGCTGAAAATGGCCAGATCAGAGTCACTGAGAAATTTGCTTCACAAAAGGCTTCACGAGTTAATTCATCAAGAAAAGAAGAAGATATGCGATTGAATTCTCTGAAAAGAGACGAAGGTGTTCGAATAAATTCCTCACAGAGAGCTGATAGTATTCGATCAAAGGTGAAAACAGATGGAGGTGACATGAAAGTTGGTTATTTGGATAAGAAAGTCAACGGTTCAAACAGAGTACACGATGATCAAATTGAGAAAAGGAAGAGGGAGAGGTTAGAAGCAGCCATTTCTGCTAATTATCCTGGAAAAGGAAGCATTCCAAAGGGTATGGTGGAAGCAGAGCAAGTTGCAGCTGGTTGGCCAAGCTGGCTCTCCTCTGTGGCCGGTGAAGCGCTCGACGGATGGCTGCCACGAAAAGCCGATACTTTCGAGAAACTAGACAAGATAGGACAAGGCACATATAGTAGTGTTTACAAGGCTCGTGATATCGTTCACGGTAAACTAGTTGCTCTAAAACGAGTTCGATTTGATAATCTTGATGTGGAGAGTGTCAGGTTTATGGCCAGGGAAATCCTTATCCTACGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACATCTCCGCGATCATGTAGCTTGTACCTTGTTTTTGAGTACATGGAGCATGATCTTACAGGGCTCGCATCTCGGCCCGGCGTCAAGTTCAGCGAACCACAGGTTAAATGCTATATGCAACAACTTCTAAGCGGGATTGATTATTGTCACAGTCGTGGTGTCCTCCACCGCGATATAAAGGGGTCAAATCTCCTAATCGACGACAATGGTATCTTGAAGATTGCAGATTTTGGATTAGCAAGTCCTTTCGACCCTCATAATCGTGTTCCCCTAACCAGCCGTGTAGTGACTCTATGGTACCGACCACCCGAACTTCTGCTTGGAGCTTCCCATTATGGGGTTGCAGTGGACCTGTGGAGTACTGGTTGCATAATAGCTGAGCTATATGCTGGGAAGCCTATCTTACCTGGAAAAACTGAGGTGGAACAGTTGCATAAGATCTTTAAACTTTGCGGTTCGCCACCTGAGGATTATTGGAGGAAATTGCAGTTACCTCATTCAGCTGCATTCAAGACGGCTCAGCCATACCGACGTTGTATTGGAGAAATGCTCAAAGACTTCCCATCTGCTGCGGTCACTCTCGTGGATAAGCTGCTTTCTGTAGATCCTGCTCATCGAGGAACTGCAGCTGCTGCTCTAAAGAGTGAGTTTTTTACGACTAAACCTCATGCTTGCGAGACTTCGAGTTTGCCCAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTTCAAGTCTGCAGAAGGCAGGCAAGAGTTGAGGGAAAAGACCCTAAACATTATGTGGAAGGAAGAAGACCTCAAGAAGGTCACTATAATCTTTCTATGAATGCAAAGGATGAAGCAAACATGTTAATGCAGAAAAGGCAAGGCCATTCAAGTATGAATGGGCAGAGCGGAGCGTTCAATCCGCGCGGGGACAAAACAGTTTCTGGTTTTTTGATTGCTCCACCCAAACAAAGCCAATCTGTCACAGAAATTTGCTCAGATACAGGCAGGATTTCACATTCAGGACCGCTAATTAGCAAACCAGATTGGATGAGATCTGGAAAGCAACTCGATGACCATTCGATGGCGCTTGACGGATCCAATCTCTCAGGATTATCCCGCTTAGTAGCAACGAGGTCTAATATATCTGACCATCCCTACGAGAGACCTGGTCCATCACGATCAGAAGTAGGCAGATTGCCTGACTTCGTTAGGGAGTCAGAGTCGACGAGAAAGCAGGATCGAATATTTTATACACACCGTGTTGCAGATTCATACCGGATAGAGAACGAAAAAGCTTGTGCTAAAGAACAGTCCCTGTTTGCTCATGGGACAGATATGAACAAGCTTTATACTTCTGGTCCAATCCTTGGTCCATCAAACAACAACTTAGATAAAATTCTGAAAGAGCGAGATCGTCAGATTCAAGAACACGCTCGACAAGCACGACACGGAAAAGCTGCTAACAGTCAGTTGAAGGGTACAAGAGGAACATCGGGAAAACATCTCACGTCGATCCACTGA 2160 44.95 MGCPCSKPSAAENGQIRVTEKFASQKASRVNSSRKEEDMRLNSLKRDEGVRINSSQRADSIRSKVKTDGGDMKVGYLDKKVNGSNRVHDDQIEKRKRERLEAAISANYPGKGSIPKGMVEAEQVAAGWPSWLSSVAGEALDGWLPRKADTFEKLDKIGQGTYSSVYKARDIVHGKLVALKRVRFDNLDVESVRFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLVFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLSGIDYCHSRGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPHNRVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCIIAELYAGKPILPGKTEVEQLHKIFKLCGSPPEDYWRKLQLPHSAAFKTAQPYRRCIGEMLKDFPSAAVTLVDKLLSVDPAHRGTAAAALKSEFFTTKPHACETSSLPKYPPSKEIDAKFQVCRRQARVEGKDPKHYVEGRRPQEGHYNLSMNAKDEANMLMQKRQGHSSMNGQSGAFNPRGDKTVSGFLIAPPKQSQSVTEICSDTGRISHSGPLISKPDWMRSGKQLDDHSMALDGSNLSGLSRLVATRSNISDHPYERPGPSRSEVGRLPDFVRESESTRKQDRIFYTHRVADSYRIENEKACAKEQSLFAHGTDMNKLYTSGPILGPSNNNLDKILKERDRQIQEHARQARHGKAANSQLKGTRGTSGKHLTSIH 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4760355 4764186 + Hsped.08g05450.1 Hepe08g0545 576517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0545 719 CDD STKc_CDK9_like 151 435 - -
Hepe08g0545 719 FunFam probable serine/threonine-protein kinase At1g54610 138 233 - -
Hepe08g0545 719 ProSiteProfiles Protein kinase domain profile. 151 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0545 719 MobiDBLite consensus disorder prediction 703 719 - -
Hepe08g0545 719 SUPERFAMILY Protein kinase-like (PK-like) 146 439 IPR011009 -
Hepe08g0545 719 Pfam Protein kinase domain 151 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0545 719 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524(InterPro)
Hepe08g0545 719 SMART serkin_6 151 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0545 719 Gene3D Transferase(Phosphotransferase) domain 1 234 473 - -
Hepe08g0545 719 FunFam probable serine/threonine-protein kinase At1g54610 234 473 - -
Hepe08g0545 719 PANTHER CELL DIVISION PROTEIN KINASE 150 435 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Hepe08g0545 719 MobiDBLite consensus disorder prediction 16 41 - -
Hepe08g0545 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0545 719 Gene3D Phosphorylase Kinase; domain 1 138 233 - -
Hepe08g0545 719 MobiDBLite consensus disorder prediction 686 719 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1035 Hepe-Chr7:14915394 Hepe08g0545 Hepe-Chr8:4760355 3.63e-240 dispersed
Hepe08g0545 Hepe-Chr8:4760355 Hepe08g2381 Hepe-Chr8:64277137 5.80e-184 dispersed
Hepe08g0544 Hepe-Chr8:4752757 Hepe08g0545 Hepe-Chr8:4760355 2.14e-195 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73028 PF00069 Pkinase 4.60E-67 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0545 - - - 0.0