Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g0558 | ATGTCGACTTCGGTTCGGATGGTAATTGTAGCAAACGAGCTTCCTCTAGAAGCAGATCAAAGAGATGATAAAAGTTGGAGTTTCAGTTGGGATAAAGATTCTTTGTTTTTCCAACTGAAGGATGGTTTTCCAGACAAGATGATTGTTTTCCATGTCGGATGTCTGAAGGCTAACAACATTCCTGAGCATGAACAACAAGAAGTGTCCAAGAAATTGCTGGATGAATTATTATGCATTCCTACATTTTTGCCTCCTGAAATCTTAAACAAGTTTTATAATCGTTTCTGTAAGGGGTATCTGTGGCCTCTTTTCCACTCTATGGAACCTTTTGGTGGTTCTATCAATATCCCGGTTCGACCTTTCTGGGACGCATACGTTTCGGCGAATAGGTCGTTTTCTCAAAAAGTGATGGAAGTATGCAATCCAGAAGGAGATTACATTTGGATCCATGATTACCATTTAATGGTGCTTCCAAGCTTCTTAAGAGAGAAGTATGTTCGGATGAAGATAGGATTTTTCCTTCACATCCCTTTTCCTTCATTTGAGACCTACAGAACTCTTATTGTAAGAGAAGAAATACTCGAGTCTTTGCTCAACTGTGATGTAATTGGATTCCACAATTATGATTATGCTCGAAATTTCCTTTCGTGTTGCAGCCGAATTCTCGGCCTAAAACATAAGCTAGATAAAGGCTTTCTTGAATTGGAATACTATGGAAGGAATATTAGGATAAAAGTTATGCCAGTCGGGATCGATATGGATCGAATCGAGCCGGTGATGAGAAAGGTGGAAGGGGAGTTTCAAGAAAGGACTGGAGAACACTTGGTTGGAAAGACAGTCCTACTAAGTATAGATGATATTGACATTTACAAAGGTATTGAACTGAAAATGCTTGCAATGGAACACATGCTAAAACAGCATCAAGAAGAGCAGGGAAAAGCAGTATTAGTTCAGATACTGAACCCTGCTAGAGACCAAGGGATACCTTATGATAACATACTATGTAGAATAAGAGAGATCTGCGAAAGAATAAACAAAACGTACGAGCAACCGGGCTACAAGCCAATCTATCTCCTTGAACATCAAGTTTGCACCATTGAGAGGTTTGCCTATTATAGCATAGCTGAGTGCCTTGTTGTTACACCTTTTAAGGATGGAATGAACCTTTATCCTTATGAATATACTGCCTGTAGACAGTGGATAACTGGTTTGGGATCATCCGTAAGCTCACATGTGCCGCTCAGGAAGAGCATGGTAGTGATATCAGAATTCACGGGGTGTTCTTTATCACTGTGCGGGGCACTGCGTGTCAATCCATGGGATGGCGAAGAACTTTCCATGAAAATGTACAATGCGATTTCGATGGATGATGCGCTGAAACAAATACGACATAGGAATAATTACAAGCATATTAGCAAGCATGATGTGGTTCACTGGTCAACAAGTTTCTACAAAGACATGGTGAGAACTTGGGAAAATCAGTCCTGGAGAGCATTCTCGGGAGTTGACTCTGGCCTTCACTTCACGGTTGTGTCTGTTGATCCCCGTTTCGAAAAGCTTCCAATAGATACTATGACATCAGACTACAAGAAGGCAAAGACTAGGGCCATTCTGTTGGACTATGATGGCACATTGATTCCCATAAACTCTGTAGATAAATCTCCCAGTGAGGATCTTATCTCAACTCTCAACTATCTTTGTAACGATAAGGGGAATGTAGTTTTTGTTGTTAGTGGAAGAGGGAAAGACAACTTAAGTGAGTGGTTCAAGTCTTGCAAAAATCTTGGAATAGCAGCAGAACATGGATTCTTTTTGAGATGGCCAGGAAATGAAGAATGGGAAACCTTTGGTCAGAGTTCTGATATGCATTGGAAGGGGGTAGCCGATCATATTATGGAATTTTATACTTCGGTTATCGACGGTTCATACATCGAAAGGAAAGAGTATGCTTTGGTGTGGAACTATCAGAATGCAGACTTAGGATTTGCATCTTCCCAGGCTAAAGAGCTTTTGGATCACCTAGAGGATATTTTGGCCAATGATCCTGTTACTGTCAAGAGTGGCAAGTTCATTGTACAAGTAGAATCTCAGGGAGTTAACAAAGGCACGGTTGCAAAGAGGATCCTCGAATCAATGGTCAAGAAAGAAGAGAAAGGGGACAAGTTTATACTGTCCATAGGGGATGACCAATCTGATGAGGACATGTTTGAAATCCTTAATGCAACAGTGGAAGACAATCTTTCATCCCCCAATCCAGTTTTCACATGTACTATTGGTCCAAAGCTGACCAAAGCCAAGTACTATTTGAAAGACACATTTGAAGTGATTAACGTTCTTGAACAATTAGGAGTTTATTTGTTTTTAGACCATTGA | 2373 | 40.5 | MSTSVRMVIVANELPLEADQRDDKSWSFSWDKDSLFFQLKDGFPDKMIVFHVGCLKANNIPEHEQQEVSKKLLDELLCIPTFLPPEILNKFYNRFCKGYLWPLFHSMEPFGGSINIPVRPFWDAYVSANRSFSQKVMEVCNPEGDYIWIHDYHLMVLPSFLREKYVRMKIGFFLHIPFPSFETYRTLIVREEILESLLNCDVIGFHNYDYARNFLSCCSRILGLKHKLDKGFLELEYYGRNIRIKVMPVGIDMDRIEPVMRKVEGEFQERTGEHLVGKTVLLSIDDIDIYKGIELKMLAMEHMLKQHQEEQGKAVLVQILNPARDQGIPYDNILCRIREICERINKTYEQPGYKPIYLLEHQVCTIERFAYYSIAECLVVTPFKDGMNLYPYEYTACRQWITGLGSSVSSHVPLRKSMVVISEFTGCSLSLCGALRVNPWDGEELSMKMYNAISMDDALKQIRHRNNYKHISKHDVVHWSTSFYKDMVRTWENQSWRAFSGVDSGLHFTVVSVDPRFEKLPIDTMTSDYKKAKTRAILLDYDGTLIPINSVDKSPSEDLISTLNYLCNDKGNVVFVVSGRGKDNLSEWFKSCKNLGIAAEHGFFLRWPGNEEWETFGQSSDMHWKGVADHIMEFYTSVIDGSYIERKEYALVWNYQNADLGFASSQAKELLDHLEDILANDPVTVKSGKFIVQVESQGVNKGTVAKRILESMVKKEEKGDKFILSIGDDQSDEDMFEILNATVEDNLSSPNPVFTCTIGPKLTKAKYYLKDTFEVINVLEQLGVYLFLDH | 790 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 4858014 | 4860615 | - | Hsped.08g05580.1 | Hepe08g0558 | 576530 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g0558 | 790 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 664 | 785 | - | - | |
| Hepe08g0558 | 790 | Gene3D | - | 537 | 769 | IPR023214 | - | |
| Hepe08g0558 | 790 | FunFam | Trehalose-6-phosphate synthase 8 | 1 | 258 | - | - | |
| Hepe08g0558 | 790 | Coils | Coil | 290 | 310 | - | - | |
| Hepe08g0558 | 790 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 4 | 782 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER) | |
| Hepe08g0558 | 790 | Gene3D | - | 618 | 697 | - | - | |
| Hepe08g0558 | 790 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 6 | 491 | - | - | |
| Hepe08g0558 | 790 | Gene3D | Glycogen Phosphorylase B; | 1 | 264 | - | - | |
| Hepe08g0558 | 790 | Pfam | Glycosyltransferase family 20 | 6 | 487 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
| Hepe08g0558 | 790 | CDD | HAD_TPP | 536 | 777 | - | - | |
| Hepe08g0558 | 790 | Pfam | Trehalose-phosphatase | 538 | 771 | IPR003337 | GO:0005992(InterPro) | |
| Hepe08g0558 | 790 | NCBIfam | HAD-IIB family hydrolase | 537 | 743 | IPR006379 | - | |
| Hepe08g0558 | 790 | NCBIfam | trehalose-phosphatase | 532 | 782 | IPR003337 | GO:0005992(InterPro) | |
| Hepe08g0558 | 790 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 259 | 472 | - | - | |
| Hepe08g0558 | 790 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 534 | 651 | - | - | |
| Hepe08g0558 | 790 | Gene3D | Glycogen Phosphorylase B; | 265 | 473 | - | - | |
| Hepe08g0558 | 790 | SUPERFAMILY | HAD-like | 535 | 783 | IPR036412 | - | |
| Hepe08g0558 | 790 | CDD | GT20_TPS | 6 | 487 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe08g0558 | Hepe-Chr8:4858014 | Hepe09g0190 | Hepe-Chr9:1493385 | 9.79e-276 | dispersed | |
| Hepe02g0118 | Hepe-Chr2:1363625 | Hepe08g0558 | Hepe-Chr8:4858014 | 6.39e-318 | wgd | |
| Hepe04g1932 | Hepe-Chr4:74256909 | Hepe08g0558 | Hepe-Chr8:4858014 | 4.74e-275 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g0558 | K16055 | - | mtr:11418348 | 900.582 |