Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0587 | ATGAAATTCGAAAACCAGAACCTGAACCAACAGTCTGAACAAATATGCAGGACTATTGAGGTCGATACAATTGATCACCATCTCAGTATTTCATCGGTAGTCGTAATGGAAGCTTCCGAAGATTGCGAGAGGGATGGCGACGGCCTCTACATCCCTCCCCTCAACTTTTCCATGGTTGATAATGCCATTTTCCGCTCCGGCTTCCCTGACTCTGCCAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATATGTTTATGTCCGGAGCCATATCCAGAACACAACATGGAGTTCCTCAAGTCTAACGGGATTAGATTGTATCAATTTGGAATCGAAAGCTACAAGGAGCCTTTTGTGAACATCCCAGACGATATGATTCGTGAAGCATTGAAAGTTGTCCTTGACGATAGGAATCATCCCGTTCTCATACATTGCAAGAGAGGAAAGCATCGAACAGGTTGTCTTGTGGGATGCCTGAGAAAATTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAATACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAGTTGTTCGATATCTCCGGCTGGAAGCATCTTCCCATGTCATTCTCATGTTCAAAGAGCTGTATGATCATCATCTCATTTCTGGTTCCTTCCAAGACGAAGAAGCTGGAAGCTCAGTGGACAAAGCAGGGCAACCACTCAAAATCAAAGTGGCACCGGATCGCGCTCGACGACCAACGAGACCTTCAAACAATTCCTAGAGACTTCGATTCACCCACCTTAACTCTCTCTGTTGGAATCTCGCTTCGTCTCCAACAGCAACCCATATCCGTCGTCGTCAATTTCCGATCCCTCGGCGACGACGCGATTCCTTTAGTCGACGAACGAATTCGGGGCGTTTCAGATCGTTAA | 927 | 46.6 | MKFENQNLNQQSEQICRTIEVDTIDHHLSISSVVVMEASEDCERDGDGLYIPPLNFSMVDNAIFRSGFPDSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLYQFGIESYKEPFVNIPDDMIREALKVVLDDRNHPVLIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRFAAAKARISDQRFMELFDISGWKHLPMSFSCSKSCMIIISFLVPSKTKKLEAQWTKQGNHSKSKWHRIALDDQRDLQTIPRDFDSPTLTLSVGISLRLQQQPISVVVNFRSLGDDAIPLVDERIRGVSDR | 308 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5135298 | 5141091 | - | Hsped.08g05870.1 | Hepe08g0587 | 576559 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0587 | 308 | PRINTS | Plant and fungal dual specificity phosphatase signature | 123 | 137 | IPR020428 | GO:0016791(InterPro) | |
Hepe08g0587 | 308 | PRINTS | Plant and fungal dual specificity phosphatase signature | 106 | 120 | IPR020428 | GO:0016791(InterPro) | |
Hepe08g0587 | 308 | PRINTS | Plant and fungal dual specificity phosphatase signature | 87 | 100 | IPR020428 | GO:0016791(InterPro) | |
Hepe08g0587 | 308 | PRINTS | Plant and fungal dual specificity phosphatase signature | 50 | 67 | IPR020428 | GO:0016791(InterPro) | |
Hepe08g0587 | 308 | Pfam | Tyrosine phosphatase family | 50 | 199 | IPR004861 | - | |
Hepe08g0587 | 308 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 51 | 197 | IPR029021 | - | |
Hepe08g0587 | 308 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 145 | 155 | IPR016130 | GO:0016311(InterPro) | |
Hepe08g0587 | 308 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 55 | 206 | IPR020422 | GO:0006470(InterPro) | |
Hepe08g0587 | 308 | Gene3D | Protein tyrosine phosphatase superfamily | 50 | 199 | IPR029021 | - | |
Hepe08g0587 | 308 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 118 | 158 | IPR000387 | GO:0016311(InterPro) | |
Hepe08g0587 | 308 | CDD | PFA-DSP_Siw14 | 49 | 196 | - | - | |
Hepe08g0587 | 308 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 27 | 205 | - | GO:0005737(PANTHER)|GO:0016791(PANTHER) | |
Hepe08g0587 | 308 | FunFam | probable tyrosine-protein phosphatase At1g05000 | 49 | 199 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe09g1309 | Hepe-Chr9:19073193 | Hepe08g0587 | Hepe-Chr8:5135298 | 3.12e-72 | transposed | |
Hepe02g0073 | Hepe-Chr2:865786 | Hepe08g0587 | Hepe-Chr8:5135298 | 3.69e-103 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0587 | K18045 | - | csv:101222170 | 386.726 |