Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0587 ATGAAATTCGAAAACCAGAACCTGAACCAACAGTCTGAACAAATATGCAGGACTATTGAGGTCGATACAATTGATCACCATCTCAGTATTTCATCGGTAGTCGTAATGGAAGCTTCCGAAGATTGCGAGAGGGATGGCGACGGCCTCTACATCCCTCCCCTCAACTTTTCCATGGTTGATAATGCCATTTTCCGCTCCGGCTTCCCTGACTCTGCCAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATATGTTTATGTCCGGAGCCATATCCAGAACACAACATGGAGTTCCTCAAGTCTAACGGGATTAGATTGTATCAATTTGGAATCGAAAGCTACAAGGAGCCTTTTGTGAACATCCCAGACGATATGATTCGTGAAGCATTGAAAGTTGTCCTTGACGATAGGAATCATCCCGTTCTCATACATTGCAAGAGAGGAAAGCATCGAACAGGTTGTCTTGTGGGATGCCTGAGAAAATTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAATACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAGTTGTTCGATATCTCCGGCTGGAAGCATCTTCCCATGTCATTCTCATGTTCAAAGAGCTGTATGATCATCATCTCATTTCTGGTTCCTTCCAAGACGAAGAAGCTGGAAGCTCAGTGGACAAAGCAGGGCAACCACTCAAAATCAAAGTGGCACCGGATCGCGCTCGACGACCAACGAGACCTTCAAACAATTCCTAGAGACTTCGATTCACCCACCTTAACTCTCTCTGTTGGAATCTCGCTTCGTCTCCAACAGCAACCCATATCCGTCGTCGTCAATTTCCGATCCCTCGGCGACGACGCGATTCCTTTAGTCGACGAACGAATTCGGGGCGTTTCAGATCGTTAA 927 46.6 MKFENQNLNQQSEQICRTIEVDTIDHHLSISSVVVMEASEDCERDGDGLYIPPLNFSMVDNAIFRSGFPDSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLYQFGIESYKEPFVNIPDDMIREALKVVLDDRNHPVLIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRFAAAKARISDQRFMELFDISGWKHLPMSFSCSKSCMIIISFLVPSKTKKLEAQWTKQGNHSKSKWHRIALDDQRDLQTIPRDFDSPTLTLSVGISLRLQQQPISVVVNFRSLGDDAIPLVDERIRGVSDR 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5135298 5141091 - Hsped.08g05870.1 Hepe08g0587 576559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0587 308 PRINTS Plant and fungal dual specificity phosphatase signature 123 137 IPR020428 GO:0016791(InterPro)
Hepe08g0587 308 PRINTS Plant and fungal dual specificity phosphatase signature 106 120 IPR020428 GO:0016791(InterPro)
Hepe08g0587 308 PRINTS Plant and fungal dual specificity phosphatase signature 87 100 IPR020428 GO:0016791(InterPro)
Hepe08g0587 308 PRINTS Plant and fungal dual specificity phosphatase signature 50 67 IPR020428 GO:0016791(InterPro)
Hepe08g0587 308 Pfam Tyrosine phosphatase family 50 199 IPR004861 -
Hepe08g0587 308 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 51 197 IPR029021 -
Hepe08g0587 308 ProSitePatterns Tyrosine specific protein phosphatases active site. 145 155 IPR016130 GO:0016311(InterPro)
Hepe08g0587 308 ProSiteProfiles Dual specificity protein phosphatase domain profile. 55 206 IPR020422 GO:0006470(InterPro)
Hepe08g0587 308 Gene3D Protein tyrosine phosphatase superfamily 50 199 IPR029021 -
Hepe08g0587 308 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 118 158 IPR000387 GO:0016311(InterPro)
Hepe08g0587 308 CDD PFA-DSP_Siw14 49 196 - -
Hepe08g0587 308 PANTHER TYROSINE-PROTEIN PHOSPHATASE 27 205 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Hepe08g0587 308 FunFam probable tyrosine-protein phosphatase At1g05000 49 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g1309 Hepe-Chr9:19073193 Hepe08g0587 Hepe-Chr8:5135298 3.12e-72 transposed
Hepe02g0073 Hepe-Chr2:865786 Hepe08g0587 Hepe-Chr8:5135298 3.69e-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0587 K18045 - csv:101222170 386.726