Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0608 ATGGATTCCAGTGCACGAGCTCGTTTCACACTCGGTAAACAGTCCTCGCTCAAGCCGGAACGTGAAGTCTCCGCTGTGGTTAACGACGAGCTCGATGATCCGATCGCGATTTATCCCGGAATTAAGCTGATGTACCTGGTGAATGATGGCGACTCTGATGGAATTAGAGAGCTACTGGATTCCGGCACCGACGTGAATTTTCACGACACTGACGGACGAACCTCTTTGCATGTTGCTGCTTGTCAGGGCATGCCGGACGTTGTTGAGTTGCTACTCGAAAGAGGCGCGGAGGTCGACGTTGAGGACCGTTGGGGCAGCACGCCTCTTGCAGATGCCATATATTACAAGAATCATGATGTGATCAATCTCTTAGAGAAACGTGGTGCAAAGCCACCGATGGCTTCAATGCATGTGCAAAGTGCCCGTGAAGTTCCGGAATATGAAATCAATCCAAATGAGCTTGATTTTTCCAATAGTGTGAACATTACAAAAGGAACTTTCTGTAGTGCCTCATGGCGTGGGATTCAAGTTGCTGTAAAGACACTAAGCGAGGAAGTTTTTACTGATGAGGATAAAGTGAAGGCATTTACGGATGAACTTGCTTTACTTCAGAAGATACGACATCCTAATGTTGTCCAATTTCTGGGAGCTGTAACACAAAGTAATCCAATGATGATTGTCACAGAGTATTTGCCCCAGGGGGACCTTCATGCATTCTTGAAACGTAAAGGTTCCTTGAAGCTGACAATAGTTGTAAAGTTTGCTCTTGACATTGCTAGGGGACTGAATTATTTGCATGAGCATAAACCTGAAGCAATAATCCATCGTGATCTTGAACCTTCAAACATACTGCGGGATGATTCTGGGCACCTGAAAGTTGCAGACTTTGGAGTTAGCAAACTTCTAAAACTTTCAAATAGGGTCAAAGAAGACAGACCTGTGGCTGTCACATGTCATGACACTTCATGGCGATACGTGGCACCTGAGGTTTATAAAAATGAAGAATATGATACGAGAGTGGATGTATTTTCATTTGCTTTGATCTTGCAAGAGATGATAGAAGGCAATCCACCTTTTCCAGCAAGGCCAGAAAATGAAGTACCTAAAGCTTATATAGCTAATGAACGCCCGCCATTTATGGCTCCACCTAAGCGTTATGCAGACGGAGTAAAGGAGCTAATCGAGGAATGTTGGGACGAGAACCCACATAAAAGACCCACGTTTCGGCAAATAATAAGAAGGTTGGAGGATATTAACAATCGACTTGTTCAAATAAGGAACTTGAAGGTGAATCCATTATGCAATTGTTTCATGAACCTAACAGCCTTTTTCAAAAGGGAAAGGACTAATCCAGGCAGCAGATCTTCTAACTCGGAAAGCAAATGA 1386 43.94 MDSSARARFTLGKQSSLKPEREVSAVVNDELDDPIAIYPGIKLMYLVNDGDSDGIRELLDSGTDVNFHDTDGRTSLHVAACQGMPDVVELLLERGAEVDVEDRWGSTPLADAIYYKNHDVINLLEKRGAKPPMASMHVQSAREVPEYEINPNELDFSNSVNITKGTFCSASWRGIQVAVKTLSEEVFTDEDKVKAFTDELALLQKIRHPNVVQFLGAVTQSNPMMIVTEYLPQGDLHAFLKRKGSLKLTIVVKFALDIARGLNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKLSNRVKEDRPVAVTCHDTSWRYVAPEVYKNEEYDTRVDVFSFALILQEMIEGNPPFPARPENEVPKAYIANERPPFMAPPKRYADGVKELIEECWDENPHKRPTFRQIIRRLEDINNRLVQIRNLKVNPLCNCFMNLTAFFKRERTNPGSRSSNSESK 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5332018 5340085 + Hsped.08g06080.1 Hepe08g0608 576580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0608 461 ProSiteProfiles Protein kinase domain profile. 121 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0608 461 PIRSF ILK 2 437 - -
Hepe08g0608 461 Pfam Protein tyrosine and serine/threonine kinase 162 415 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0608 461 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515(InterPro)
Hepe08g0608 461 FunFam Os01g0748600 protein 142 436 - -
Hepe08g0608 461 SMART ANK_2a 71 100 IPR002110 GO:0005515(InterPro)
Hepe08g0608 461 SMART ANK_2a 104 133 IPR002110 GO:0005515(InterPro)
Hepe08g0608 461 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515(InterPro)
Hepe08g0608 461 Gene3D Transferase(Phosphotransferase) domain 1 232 439 - -
Hepe08g0608 461 CDD STKc_MAP3K-like 162 415 - -
Hepe08g0608 461 Gene3D Phosphorylase Kinase; domain 1 148 231 - -
Hepe08g0608 461 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Hepe08g0608 461 FunFam Integrin-linked protein kinase family 23 147 - -
Hepe08g0608 461 Gene3D - 37 145 IPR036770 -
Hepe08g0608 461 SUPERFAMILY Protein kinase-like (PK-like) 172 443 IPR011009 -
Hepe08g0608 461 FunFam serine/threonine-protein kinase STY46-like 149 232 - -
Hepe08g0608 461 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 60 416 IPR051681 GO:0004674(PANTHER)
Hepe08g0608 461 SUPERFAMILY Ankyrin repeat 42 136 IPR036770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0791 Hepe-Chr2:9019031 Hepe08g0608 Hepe-Chr8:5332018 3.12e-98 dispersed
Hepe07g1822 Hepe-Chr7:60994318 Hepe08g0608 Hepe-Chr8:5332018 1.18e-159 dispersed
Hepe08g0608 Hepe-Chr8:5332018 Hepe10g1770 Hepe-Chr10:54466366 3.19e-80 dispersed
Hepe04g1948 Hepe-Chr4:74362356 Hepe08g0608 Hepe-Chr8:5332018 1.12e-162 wgd
Hepe07g1910 Hepe-Chr7:62827043 Hepe08g0608 Hepe-Chr8:5332018 5.60e-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73031 PF07714 PK_Tyr_Ser-Thr 3.30E-57 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0608 - - - 0.0