Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0618 ATGCTGCCACCCTCACGGAGAGACTTCAAAGACATTTACGTTGTTTTTGAGTTGATGGAATCAGATCTCCACCAAGTTATTAAAGCAAATGATGATCTGACTCGAGAACATTATCAGTTTTTCCTTTACCAACTTCTTCGTGCTTTAAAATATATCCATACAGCTAATGTCTACCATCGAGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAAATTTGTGATTTTGGATTGGCAAGAGTCGCGTTCAGTGATACACCAACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTATCGAGCTCCAGAACTATGTGGTTCATTTTTCTCCAAGTATACCCCTGCAATTGATATATGGAGTATTGGCTGCATATTTGCTGAAGTACTAATGGGGAAGCCACTTTTTCCTGGTAAAAATGTTGTTCACCAACTTGATTTGATGACGGATCTTCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTGCGAAATGACAAGGCTAGAAGATATTTAACTACAATGAGGAAAAAGCAGCCAGTGCCATTTGCTCAAAAGTTTCCAAATGCAGATCCTCTAGCGCTGAGGCTACTAGAAAGGTTGCTTGCTTTTGATCCAAAAGATAGGCCAACTGCTGAAGAGGCACTGGCTGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGGCGGAGGGTCACAAAAGACGACATTCAAGAGCTAATCTTCCGTGAGATACTAGAATATCATCCTCAGCTACTTAAGGACTACATGAATGGGACTGAGAGAACAAATTTCCTATATCCAAGTGCTGTCGACCAATTTAGAAAGCAGTTTGCAGTTCTTGAGGAAAATGGTGGTAAAAGTGCGCCAGTAATTCCTCCCGACAGAAAGCATGTATCCCTCCCAAGGTCAACAGTTGTACACTCAAACACAGTCTATTCTAAGGACCAATTAAATAATGTACCCCTCCAAGATGGGCAGATCTCCGAAGAGGGATACTGCAGGAGTTCCCGGGATAGTGATGGACGGCTAACAAATATATCAAGGACTATGCAGGCACCACAAAAAATCCCATTCGCTAGGCCTGGAAGAGTGGTTGGACCAGTTATAGCAGATGAAAACGGAAGGCTAGTGAAGGAGCAGTACGATCCGAGAACGTTGATCAGAGGTGGCATTCTTCCTCCTGCATATCATTACCAAAAACCCATTGCAGGAAATCAAGAAAGATCTGCAGCAGAATCGAAACTGGATATTTCTTTAAGGGCAGCCAAGCAAGCATCCCAGTGTGGCATGGCTTCCAAATTAGGATCAGACATATCCATCAGCATCGACTCGAACCCCTTTTACATGACACGTGTCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGACGCAAACTTTCTGCAGGCAAAGGCCTCCCAATACGGTGGTCTTGGTGCAGCGACGGCCACCACCACATCGGTTGCTCACAGAAAGGTTGTTGCGGGCCAATTTAGCATGACAAAGATGTACTAG 1587 43.1 MLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKDDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAVLEENGGKSAPVIPPDRKHVSLPRSTVVHSNTVYSKDQLNNVPLQDGQISEEGYCRSSRDSDGRLTNISRTMQAPQKIPFARPGRVVGPVIADENGRLVKEQYDPRTLIRGGILPPAYHYQKPIAGNQERSAAESKLDISLRAAKQASQCGMASKLGSDISISIDSNPFYMTRVGVNKVELKDQISIDANFLQAKASQYGGLGAATATTTSVAHRKVVAGQFSMTKMY 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5410052 5415897 - Hsped.08g06180.1 Hepe08g0618 576590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0618 528 Gene3D Transferase(Phosphotransferase) domain 1 21 249 - -
Hepe08g0618 528 Pfam Protein kinase domain 8 226 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0618 528 SUPERFAMILY Protein kinase-like (PK-like) 9 230 IPR011009 -
Hepe08g0618 528 FunFam Mitogen-activated protein kinase 21 249 - -
Hepe08g0618 528 SMART serkin_6 5 226 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0618 528 Gene3D Phosphorylase Kinase; domain 1 1 272 - -
Hepe08g0618 528 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 267 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Hepe08g0618 528 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0156 Hepe-Chr3:1882401 Hepe08g0618 Hepe-Chr8:5410052 2.93e-206 dispersed
Hepe07g0951 Hepe-Chr7:12709250 Hepe08g0618 Hepe-Chr8:5410052 2.23e-101 dispersed
Hepe07g2361 Hepe-Chr7:67978607 Hepe08g0618 Hepe-Chr8:5410052 1.41e-160 dispersed
Hepe08g0618 Hepe-Chr8:5410052 Hepe09g0380 Hepe-Chr9:3381297 8.87e-190 dispersed
Hepe02g0047 Hepe-Chr2:604593 Hepe08g0618 Hepe-Chr8:5410052 1.87e-255 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73032 PF00069 Pkinase 1.70E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0618 - - - 0.0