Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0621 | ATGGCGTCTGGGAGTTCATTGAATGATCATTTATCCAAGAAGACTTCATTTTGGGGCTTGTCGTTGTGGGTTTTGATCTGCATTTGTATTGGTGCATTTATAGTTTTGATTCTTGGTTTATTATCTATGTGGATCCTGTTTCGGAAAAAATCTAAAAGATCCATGGACAAATTCCCTATTTCCCAAATACCTAATTTTTCCAAAGATATCAGGATAGACCATGTTGGGACTCAAACTCTCAATGACCACCCTGAAAATAGACTTCTTTCAGTTGATGTCAAAAGAAATGATGAAAATTCTGAAGTTATGGCTGTGACAAAATCAAGTGAACCTGATAACAATAGCCAATGCAGTTCCACTTATCAACACGAAAAAGTAGGCAATTCACAATCAGGGGAAGAAGGAAGCTCTGGGAATGCTCGGAAGCAGGCTACGAGATCATATGGAGGATATGGAGGAATTGTGCCACCTTCTCCTCTCGTTGGCTTGCCAGAAATTTCACATCTCGGATGGGGCCACTGGTTCACTCTCAGGGATCTGGAGCTTGCAACTAATCGTTTTTCTAATGAAAATATTCTTGGAGAGGGAGGATATGGGGTTGTATATAAGGGCAGACTCATCAATGGCACCGAGGTTGCAGTGAAAAAGCTTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGCCATGTTCGGCATAAGAATCTCGTTCGACTACTGGGTTATTGCATAGAAGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAACACGGCGCGTTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTTGCATATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGATGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTGGACTCTGGAGAGAGTCACATCACGACTAGAGTTATGGGAACATTTGGGTATGTGGCGCCAGAATATGCAAATACGGGCTTGTTGAACGAAAAGAGTGACATTTATAGCTTCGGCGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTATGCTCGTCCTTCTAATGAGGTTAATCTTGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTCGAGGTTAAGCCTACTACTCGCGCCTTGAAACGTGCACTTCTTGTTGCACTCAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCCGACGAATTTCCACTGCACGAGGATAGAAGAAACCGAAAAAGCCGATCGATAAGCTTGGAGATTGAGTCGATGAAAGAAATCACAGGTTCTGAGCAGACGGGTGGGCCATCAGAGAGCCATAAATCAGAGACAAGCCATGGATAG | 1524 | 43.18 | MASGSSLNDHLSKKTSFWGLSLWVLICICIGAFIVLILGLLSMWILFRKKSKRSMDKFPISQIPNFSKDIRIDHVGTQTLNDHPENRLLSVDVKRNDENSEVMAVTKSSEPDNNSQCSSTYQHEKVGNSQSGEEGSSGNARKQATRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSNENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGAFTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEVKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSISLEIESMKEITGSEQTGGPSESHKSETSHG | 507 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5451857 | 5456579 | - | Hsped.08g06210.1 | Hepe08g0621 | 576593 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0621 | 507 | Coils | Coil | 207 | 227 | - | - | |
Hepe08g0621 | 507 | MobiDBLite | consensus disorder prediction | 102 | 144 | - | - | |
Hepe08g0621 | 507 | FunFam | Putative receptor-like protein kinase | 169 | 262 | - | - | |
Hepe08g0621 | 507 | PANTHER | OS01G0323000 PROTEIN | 6 | 483 | IPR052232 | - | |
Hepe08g0621 | 507 | Gene3D | Phosphorylase Kinase; domain 1 | 169 | 262 | - | - | |
Hepe08g0621 | 507 | MobiDBLite | consensus disorder prediction | 467 | 507 | - | - | |
Hepe08g0621 | 507 | ProSitePatterns | Protein kinases ATP-binding region signature. | 193 | 216 | IPR017441 | GO:0005524(InterPro) | |
Hepe08g0621 | 507 | MobiDBLite | consensus disorder prediction | 481 | 500 | - | - | |
Hepe08g0621 | 507 | CDD | STKc_IRAK | 193 | 459 | - | - | |
Hepe08g0621 | 507 | FunFam | Putative receptor-like serine/threonine-protein kinase | 263 | 473 | - | - | |
Hepe08g0621 | 507 | SMART | serkin_6 | 187 | 441 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0621 | 507 | Pfam | Protein kinase domain | 188 | 456 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0621 | 507 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 309 | 321 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe08g0621 | 507 | Gene3D | Transferase(Phosphotransferase) domain 1 | 263 | 476 | - | - | |
Hepe08g0621 | 507 | ProSiteProfiles | Protein kinase domain profile. | 187 | 451 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0621 | 507 | SUPERFAMILY | Protein kinase-like (PK-like) | 171 | 463 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0012 | Hepe-Chr3:157791 | Hepe08g0621 | Hepe-Chr8:5451857 | 2.61e-182 | dispersed | |
Hepe08g0621 | Hepe-Chr8:5451857 | Hepe08g1295 | Hepe-Chr8:14484578 | 7.61e-179 | dispersed | |
Hepe02g3141 | Hepe-Chr2:80635931 | Hepe08g0621 | Hepe-Chr8:5451857 | 2.86e-58 | wgd | |
Hepe02g0036 | Hepe-Chr2:518877 | Hepe08g0621 | Hepe-Chr8:5451857 | 7.18e-278 | wgd | |
Hepe04g1975 | Hepe-Chr4:74598665 | Hepe08g0621 | Hepe-Chr8:5451857 | 1.14e-40 | wgd | |
Hepe07g1913 | Hepe-Chr7:62881218 | Hepe08g0621 | Hepe-Chr8:5451857 | 4.73e-60 | wgd | |
Hepe08g0621 | Hepe-Chr8:5451857 | Hepe08g1218 | Hepe-Chr8:12750459 | 1.54e-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73033 | PF00069 | Pkinase | 6.80E-49 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0621 | - | - | - | 0.0 |