Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0621 ATGGCGTCTGGGAGTTCATTGAATGATCATTTATCCAAGAAGACTTCATTTTGGGGCTTGTCGTTGTGGGTTTTGATCTGCATTTGTATTGGTGCATTTATAGTTTTGATTCTTGGTTTATTATCTATGTGGATCCTGTTTCGGAAAAAATCTAAAAGATCCATGGACAAATTCCCTATTTCCCAAATACCTAATTTTTCCAAAGATATCAGGATAGACCATGTTGGGACTCAAACTCTCAATGACCACCCTGAAAATAGACTTCTTTCAGTTGATGTCAAAAGAAATGATGAAAATTCTGAAGTTATGGCTGTGACAAAATCAAGTGAACCTGATAACAATAGCCAATGCAGTTCCACTTATCAACACGAAAAAGTAGGCAATTCACAATCAGGGGAAGAAGGAAGCTCTGGGAATGCTCGGAAGCAGGCTACGAGATCATATGGAGGATATGGAGGAATTGTGCCACCTTCTCCTCTCGTTGGCTTGCCAGAAATTTCACATCTCGGATGGGGCCACTGGTTCACTCTCAGGGATCTGGAGCTTGCAACTAATCGTTTTTCTAATGAAAATATTCTTGGAGAGGGAGGATATGGGGTTGTATATAAGGGCAGACTCATCAATGGCACCGAGGTTGCAGTGAAAAAGCTTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGCCATGTTCGGCATAAGAATCTCGTTCGACTACTGGGTTATTGCATAGAAGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAACACGGCGCGTTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTTGCATATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGATGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTGGACTCTGGAGAGAGTCACATCACGACTAGAGTTATGGGAACATTTGGGTATGTGGCGCCAGAATATGCAAATACGGGCTTGTTGAACGAAAAGAGTGACATTTATAGCTTCGGCGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTATGCTCGTCCTTCTAATGAGGTTAATCTTGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTCGAGGTTAAGCCTACTACTCGCGCCTTGAAACGTGCACTTCTTGTTGCACTCAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCCGACGAATTTCCACTGCACGAGGATAGAAGAAACCGAAAAAGCCGATCGATAAGCTTGGAGATTGAGTCGATGAAAGAAATCACAGGTTCTGAGCAGACGGGTGGGCCATCAGAGAGCCATAAATCAGAGACAAGCCATGGATAG 1524 43.18 MASGSSLNDHLSKKTSFWGLSLWVLICICIGAFIVLILGLLSMWILFRKKSKRSMDKFPISQIPNFSKDIRIDHVGTQTLNDHPENRLLSVDVKRNDENSEVMAVTKSSEPDNNSQCSSTYQHEKVGNSQSGEEGSSGNARKQATRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSNENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGAFTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEVKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSISLEIESMKEITGSEQTGGPSESHKSETSHG 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5451857 5456579 - Hsped.08g06210.1 Hepe08g0621 576593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0621 507 Coils Coil 207 227 - -
Hepe08g0621 507 MobiDBLite consensus disorder prediction 102 144 - -
Hepe08g0621 507 FunFam Putative receptor-like protein kinase 169 262 - -
Hepe08g0621 507 PANTHER OS01G0323000 PROTEIN 6 483 IPR052232 -
Hepe08g0621 507 Gene3D Phosphorylase Kinase; domain 1 169 262 - -
Hepe08g0621 507 MobiDBLite consensus disorder prediction 467 507 - -
Hepe08g0621 507 ProSitePatterns Protein kinases ATP-binding region signature. 193 216 IPR017441 GO:0005524(InterPro)
Hepe08g0621 507 MobiDBLite consensus disorder prediction 481 500 - -
Hepe08g0621 507 CDD STKc_IRAK 193 459 - -
Hepe08g0621 507 FunFam Putative receptor-like serine/threonine-protein kinase 263 473 - -
Hepe08g0621 507 SMART serkin_6 187 441 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0621 507 Pfam Protein kinase domain 188 456 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0621 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0621 507 Gene3D Transferase(Phosphotransferase) domain 1 263 476 - -
Hepe08g0621 507 ProSiteProfiles Protein kinase domain profile. 187 451 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0621 507 SUPERFAMILY Protein kinase-like (PK-like) 171 463 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0012 Hepe-Chr3:157791 Hepe08g0621 Hepe-Chr8:5451857 2.61e-182 dispersed
Hepe08g0621 Hepe-Chr8:5451857 Hepe08g1295 Hepe-Chr8:14484578 7.61e-179 dispersed
Hepe02g3141 Hepe-Chr2:80635931 Hepe08g0621 Hepe-Chr8:5451857 2.86e-58 wgd
Hepe02g0036 Hepe-Chr2:518877 Hepe08g0621 Hepe-Chr8:5451857 7.18e-278 wgd
Hepe04g1975 Hepe-Chr4:74598665 Hepe08g0621 Hepe-Chr8:5451857 1.14e-40 wgd
Hepe07g1913 Hepe-Chr7:62881218 Hepe08g0621 Hepe-Chr8:5451857 4.73e-60 wgd
Hepe08g0621 Hepe-Chr8:5451857 Hepe08g1218 Hepe-Chr8:12750459 1.54e-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73033 PF00069 Pkinase 6.80E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0621 - - - 0.0