Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0630 | ATGAAAGAGAATGGAAGAAAACAAGGCACTCTTTCACCATGTGCAGCTTGTAAGCTTCTTCGTCGGAGATGCGCCCAAGATTGCGTTTTCGCTCCTTATTTCCCCGCCGACGAGCCTCATAAGTTCGCCAGCGTCCATAAAGTCTTCGGAGCCAGTAATGTCAACAAGATGTTACAGGAACTTCCAGAGCACCAACGAAACGACGCGGTGAGTTCAATGGTGTACGAAGCGAACGCGAGAGTGCGAGATCCGGTGTATGGTTGCGTGGGAGCCATATCATCGTTGCAACAACAAATCGATCTCTTGCAAACACAACTAGCGATCGCACAGGCAGAGGTGGTTCACATGCGGATGCGCCAGTTCCCGTCGTCGTCCTCCAACCCGACGCCGGAAACCGCCTCGCCCTCGGGGAAGATGAACATTCCGGCGCAAAACAAGTCCTATTTTTCCATGGACATGGTTGAGCACGACAACATGGGGGAGTCCTTGTGGTCGTCATGCTAG | 504 | 52.58 | MKENGRKQGTLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRNDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFPSSSSNPTPETASPSGKMNIPAQNKSYFSMDMVEHDNMGESLWSSC | 167 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5603072 | 5605142 | + | Hsped.08g06300.1 | Hepe08g0630 | 576602 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0630 | 167 | Coils | Coil | 92 | 112 | - | - | |
Hepe08g0630 | 167 | ProSiteProfiles | LOB domain profile. | 12 | 113 | IPR004883 | - | |
Hepe08g0630 | 167 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 12 | 135 | - | - | |
Hepe08g0630 | 167 | MobiDBLite | consensus disorder prediction | 119 | 142 | - | - | |
Hepe08g0630 | 167 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 110 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0656 | Hepe-Chr1:68736318 | Hepe08g0630 | Hepe-Chr8:5603072 | 9.63e-52 | dispersed | |
Hepe01g0685 | Hepe-Chr1:69160164 | Hepe08g0630 | Hepe-Chr8:5603072 | 3.01e-56 | dispersed | |
Hepe02g2983 | Hepe-Chr2:79051994 | Hepe08g0630 | Hepe-Chr8:5603072 | 5.72e-45 | dispersed | |
Hepe02g3287 | Hepe-Chr2:82479948 | Hepe08g0630 | Hepe-Chr8:5603072 | 2.64e-49 | dispersed | |
Hepe06g1936 | Hepe-Chr6:70591110 | Hepe08g0630 | Hepe-Chr8:5603072 | 2.16e-36 | dispersed | |
Hepe07g1643 | Hepe-Chr7:57647791 | Hepe08g0630 | Hepe-Chr8:5603072 | 3.52e-68 | dispersed | |
Hepe08g0630 | Hepe-Chr8:5603072 | Hepe08g0703 | Hepe-Chr8:6338705 | 2.39e-55 | dispersed | |
Hepe08g0433 | Hepe-Chr8:3815202 | Hepe08g0630 | Hepe-Chr8:5603072 | 8.56e-24 | transposed | |
Hepe02g3147 | Hepe-Chr2:80696914 | Hepe08g0630 | Hepe-Chr8:5603072 | 2.45e-28 | wgd | |
Hepe02g0029 | Hepe-Chr2:441251 | Hepe08g0630 | Hepe-Chr8:5603072 | 5.32e-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56137 | PF03195 | LOB | 7.30E-44 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0630 | - | - | - | 0.0 |