Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0632 ATGTCGCAGAGCACTGGCCCTGATTTCAATCTGCCGGATGAGATTCTGGCGGTGATTCCAACGGATCCGTACGATCAGCTCGATCTTGCGCGTAAAATCACCTCCATGGCGATTGCTTCTCGTGTGTCCAATCTTGAAGCTGACATGGTAAGGATGAAGCAAAAGCTTCAAGATAAGGAAAAAATCGTCTGCAACCTGCAAGAGAAGTTGTCTCACTTCGAGCACGCCAACCAGGAAGCTGAGTCTAGGTTGAAGATTGCGCTCGACGATAATATGAGGCTTTCCAGGGAGCGGGATTCACTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCCAAGCTGGAAACATTTAAGAGACAACTTATGCTCTCGTTGAGTGATGAATCCTCTCAAACTGAAACCGTTGATATTGGGACCTGTGATCAAGCAGTTCCTAAAGCATATACTGACAAGGATGAGGTAACAAATGGACATGCCGCACATTCTTTCAGTGGTTCTACAGAGACGAGAAACACAATTGATGAAGGAAAACATATTGGACAGAGATTTTCATCGCCATATATTACCCCAAGGCTCACTCCATCTGCAACTCCAAAAATTATTTCAACAACTGTATCCCCCAAAAGGTATTCCACCACTGCTTCTCCACAGATAACCTCTGGTTCAACTTCTCCATCAAAACTCTCTTATGATGGACGGATTGCACTATCTCCTTGGTACCCGTCAAGCCAGCAGTCTTCAGCAGCAAGTTCTCCTCCTCGTTCTCGTCAACTGGCTGGTCGCCCTGCTCGAGTTGATGGCAAGGAATTTTTTCGCCTAGCCAGGAGTCGTCTATCATACGAGCAGTTTAGCGCCTTTCTTTCAAACATAAAAGAACTCAATGCTCAAAAGCAGACTAGAGAGGTAACTTTAAGAAAAGCAGAAGAGATATTTGGGACAGATAACAAAGATCTTTTTGTGTCATTTCAAGGATTGCTTAACCGCAATATTCACTAA 999 44.34 MSQSTGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLQDKEKIVCNLQEKLSHFEHANQEAESRLKIALDDNMRLSRERDSLSMTSKKLGRDLAKLETFKRQLMLSLSDESSQTETVDIGTCDQAVPKAYTDKDEVTNGHAAHSFSGSTETRNTIDEGKHIGQRFSSPYITPRLTPSATPKIISTTVSPKRYSTTASPQITSGSTSPSKLSYDGRIALSPWYPSSQQSSAASSPPRSRQLAGRPARVDGKEFFRLARSRLSYEQFSAFLSNIKELNAQKQTREVTLRKAEEIFGTDNKDLFVSFQGLLNRNIH 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5620740 5625096 - Hsped.08g06320.1 Hepe08g0632 576604

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0632 332 MobiDBLite consensus disorder prediction 242 263 - -
Hepe08g0632 332 Coils Coil 291 311 - -
Hepe08g0632 332 MobiDBLite consensus disorder prediction 181 230 - -
Hepe08g0632 332 Coils Coil 42 62 - -
Hepe08g0632 332 MobiDBLite consensus disorder prediction 187 230 - -
Hepe08g0632 332 Coils Coil 77 97 - -
Hepe08g0632 332 MobiDBLite consensus disorder prediction 153 172 - -
Hepe08g0632 332 PANTHER OS03G0659800 PROTEIN 1 332 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0632 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1497 Hepe-Chr5:64447727 Hepe08g0632 Hepe-Chr8:5620740 3.03e-41 dispersed
Hepe08g0632 Hepe-Chr8:5620740 Hepe03g0145 Hepe-Chr3:1750605 3.23e-57 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1084 . . . . . . . . . . . . . . . . Cpe16g00719 . . . . . . . Cla02g01816 Cam02g1922 Cec02g1943 Cco02g1987 Clacu02g1904 Cmu02g1851 Cre02g2165 . . . . . . . Cme11g01598 . . . . . . . Bma12g00594 . . . . . . . . Cpe05g01035 Bhi10g00960 Tan05g0605 . . Hepe08g0632 . . . . . . . . . . Csa06g01166 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010490 1 2 0 1 1 1 0 1 1 0 0 1 1 1 1 2 1 1 1 1 1 1 1 1 1 0 1 3 4 1 32