Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0633 ATGCATATGGAGAATTTATCATCTAGTGATCCATCGCATCAGTCAATGTACGAAAATAGTGATTCGAAGCACTCACAGGATGATGGGTTGGAGGATGGCTCTCGATGGTATTTTTCTAGGAAGGAATTAGAAGAATACTCACCTTCTAATCAAGATGGGATTGACTTGAAAAAGGAGACATATTTACGTAAATCATACTGTACATTTCTCCAAGATTTGGGAATGAGACTTAAAGTTCCCCAGGTAACCATTGCTACAGCAATAATTTTTTGCCATAGGTTCTTCCTTCGGCAGTCTCATGCAAAGAATGACCGAAGGACAATTGCGACAGTGTGTATGTTTCTCGCAGGAAAGGTTGAAGAAACCCCTCGCCCGTTGAAGGATGTTATTATGGTCTCATATGAAATCATCAACAAAAAGGATCCTACTGCAGCCCAGAAAATAAGGCAAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGGGTTGTTCTCGCAACTCTTGCTTTTGATCTTAATGTGCACCATCCTTACAAACCCCTTGTTGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAAGTTGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCCGGTGCCATTTTCCTCGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGGCAATTGGAGGAAGTCAGCAATCAGATGTTGGAACTTTATGAACAAAATCGATTGCCGCCTTCTGGTGAAGCTGATGGAAGCATTGGAGGTGGTCCCATTAATCAAACCCCAACAAAAGCTCCTACTAACAGCGAAGAACGTGCCGTAACGGACAATCATGCACTTGGTGCAGGTATTGCTACTTCAAGACTTGGAACCTCAAAAGCTGGTACATCTAGGCCAGCATCTGAACACTCGTTTGCAGGTGATCAGCCTTCGAGAGCAATGCCGAATCATAGTATTGAAAGTTCGAGTATAGATTTTAGAAGTCCTTCGAATCACAAAACAGGTAGTGAATCTAAGGTTAGACAGGAGATGGAGCCATCAGCTTTCCACGACAAGGGAAAGGCTCAAAACTCGTTAAAGCATCAGTCAGAGGGATTAGTTGAGCAAGACCATGGAAATGATATGAAAATAAATGAAACAAGGGATGCAATGGAACTGAAAGACAAACATGTAATTCGAAATATAGATTTTAGAGAAGGTACACTTGGAAAATCTCAGGACGTTATCAAAAAGATCGATAAGGACAAAGTAAAGGCCGCACTTGAGAAACGAAGGAAGTCTCTTGGCAGCATGACCCAGAAAAAAGAATTGATGATGGATGAGGATGATCTCATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGCTGGCAGTGAGAAAATCAAGCGAGAACAGAGGCAAACATGGAATATGCCATCGAATAAACAAGAACACGAGAATGATTTGTATCAAGACAAACATCGAGAGGACGATAGAGATGAGCATCCTCAAAGAACGCGACAATCGTCATATGATCTAGATTCTAGCAACATGGAAGAAGGGGAGTTCGGAAACGCTAATGAAGTTGGTTATGGGTATCAAGAGTCTCCAAAGTCAAACAACAGTCGTAAGAGAGGCAGAGAGCTCACAGGATAA 1734 42.21 MHMENLSSSDPSHQSMYENSDSKHSQDDGLEDGSRWYFSRKELEEYSPSNQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLAFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRLPPSGEADGSIGGGPINQTPTKAPTNSEERAVTDNHALGAGIATSRLGTSKAGTSRPASEHSFAGDQPSRAMPNHSIESSSIDFRSPSNHKTGSESKVRQEMEPSAFHDKGKAQNSLKHQSEGLVEQDHGNDMKINETRDAMELKDKHVIRNIDFREGTLGKSQDVIKKIDKDKVKAALEKRRKSLGSMTQKKELMMDEDDLIERELEAGVEMAAGSEKIKREQRQTWNMPSNKQEHENDLYQDKHREDDRDEHPQRTRQSSYDLDSSNMEEGEFGNANEVGYGYQESPKSNNSRKRGRELTG 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5625639 5636912 - Hsped.08g06330.1 Hepe08g0633 576605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0633 577 MobiDBLite consensus disorder prediction 346 363 - -
Hepe08g0633 577 MobiDBLite consensus disorder prediction 364 402 - -
Hepe08g0633 577 FunFam Cyclin-T1-5 like 178 282 - -
Hepe08g0633 577 MobiDBLite consensus disorder prediction 481 499 - -
Hepe08g0633 577 MobiDBLite consensus disorder prediction 274 304 - -
Hepe08g0633 577 Pfam Cyclin-T2-like, C-terminal domain 181 268 - -
Hepe08g0633 577 FunFam Cyclin-T1-5 like 25 176 - -
Hepe08g0633 577 Gene3D - 178 278 - -
Hepe08g0633 577 MobiDBLite consensus disorder prediction 1 19 - -
Hepe08g0633 577 CDD CYCLIN_AcCycT_rpt2 179 271 - -
Hepe08g0633 577 Gene3D - 27 176 - -
Hepe08g0633 577 MobiDBLite consensus disorder prediction 288 304 - -
Hepe08g0633 577 MobiDBLite consensus disorder prediction 481 577 - -
Hepe08g0633 577 SMART cyclin_7 68 170 IPR013763 -
Hepe08g0633 577 SMART cyclin_7 183 268 IPR013763 -
Hepe08g0633 577 MobiDBLite consensus disorder prediction 316 402 - -
Hepe08g0633 577 PIRSF Cyclin_L 34 479 - -
Hepe08g0633 577 PIRSF Cyclin_L 478 576 - -
Hepe08g0633 577 PANTHER CYCLIN 33 461 IPR043198 GO:0005634(PANTHER)|GO:0006357(InterPro)|GO:0006357(PANTHER)|GO:0008024(PANTHER)|GO:0016538(InterPro)|GO:0016538(PANTHER)|GO:0032786(PANTHER)|GO:0061575(PANTHER)
Hepe08g0633 577 MobiDBLite consensus disorder prediction 321 336 - -
Hepe08g0633 577 MobiDBLite consensus disorder prediction 511 534 - -
Hepe08g0633 577 SUPERFAMILY Cyclin-like 33 178 IPR036915 -
Hepe08g0633 577 MobiDBLite consensus disorder prediction 1 32 - -
Hepe08g0633 577 Pfam Cyclin, N-terminal domain 40 177 IPR006671 -
Hepe08g0633 577 CDD CYCLIN_AcCycT_rpt1 52 175 - -
Hepe08g0633 577 SUPERFAMILY Cyclin-like 179 275 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1646 Hepe-Chr7:57710129 Hepe08g0633 Hepe-Chr8:5625639 6.86e-23 dispersed
Hepe07g1647 Hepe-Chr7:57711397 Hepe08g0633 Hepe-Chr8:5625639 6.99e-151 dispersed
Hepe08g0633 Hepe-Chr8:5625639 Hepe10g0615 Hepe-Chr10:7650923 7.75e-108 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0633 K15188 - csv:101220862 1039.64