Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0634 ATGAAGAATCGATCTCATTCACTCCATGATCTGTCCATTACTTCTTCCTCCTCGAAGCTTCGCACATCACGAGGCTCTCGTTCTGCTGTCTGCCGCAGGTGGCATTTCTCCTTCCTGCTTCTCCATCGTCTCCGTTTCCAGTCCTCTGAACTCAAACTCCACCCAATTTCATCGGCTAGGGTTCCTTTGATTTGGGGTTTTGTACAGTTGGGTTTGATTCTAATGCCTATGGCCACCGCACCCTTGAACAAAATCGAGCGAGCCCACCAGATGTATCGCGAGGGGCTCTATGTCGAAGCTCTCAGTTTCTACACCGAAGCACTTTCCATGGCCAAGACCAAGTCCCAGAGGATTGCGCTCCATAGTAATAGGGCTGCCTGTCACTTGAAACTTCATGATTTTAAGACGGCAGCAGAAGAATGTACGTGGGTTCTTGAACTTGATCACAAGCACACTGGAGCGCTAATGCTTCGTGCTCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTGTTTGATGTCAACAGACTTTTAGAACTGAACCCATCATCAGAAGTTTATCAAAATCTCTATACTCGTCTCAAGACGCAATTGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTTGAGGAAGAGGAAGTGGAGGAAGAAGAAGAGTATGATGTTGAGTTCGATGCATATGCAGCCAAGGAGAAGTGCAATGAGGGAAAAGAAAATGTTGTAGCTCCAAGTATTGCACAAGTACAGAAACCCGAGCACAATTGCAATTTGACCAAAAATGCCATTATCCAGACAACTCAAGGCAACGGTGGATTATCTGGAGATGGGGGCAATCAGAAAGCTGAGGTGAAAATGACTACTAAAAGTGAAGTTGTTGCCCCCCAAGTACAGAGCAGGAAGGGCACAACTGACCTAGATCCCAAGGGCTGGCAAACAATCCCAAAACCAAAAGGACACTCAACTTTAGACTATGCACGTTGGGACAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGAAGAAGAAGAAGAGTCTCGACCTCAATTTCGTTTTCGTGTTCGAACTGTTGGCGTTAAACCTGTAAAATGA 1098 45.9 MKNRSHSLHDLSITSSSSKLRTSRGSRSAVCRRWHFSFLLLHRLRFQSSELKLHPISSARVPLIWGFVQLGLILMPMATAPLNKIERAHQMYREGLYVEALSFYTEALSMAKTKSQRIALHSNRAACHLKLHDFKTAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLYTRLKTQLSLAPIPESEAELEEEEVEEEEEYDVEFDAYAAKEKCNEGKENVVAPSIAQVQKPEHNCNLTKNAIIQTTQGNGGLSGDGGNQKAEVKMTTKSEVVAPQVQSRKGTTDLDPKGWQTIPKPKGHSTLDYARWDRVEDDSSEDDDDEEEEESRPQFRFRVRTVGVKPVK 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5638443 5641902 - Hsped.08g06340.1 Hepe08g0634 576606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0634 365 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 77 365 - -
Hepe08g0634 365 SMART tpr_5 81 114 IPR019734 GO:0005515(InterPro)
Hepe08g0634 365 SMART tpr_5 152 185 IPR019734 GO:0005515(InterPro)
Hepe08g0634 365 SMART tpr_5 118 151 IPR019734 GO:0005515(InterPro)
Hepe08g0634 365 Gene3D Tetratricopeptide repeat domain 77 203 IPR011990 GO:0005515(InterPro)
Hepe08g0634 365 MobiDBLite consensus disorder prediction 269 307 - -
Hepe08g0634 365 SUPERFAMILY TPR-like 85 198 IPR011990 GO:0005515(InterPro)
Hepe08g0634 365 MobiDBLite consensus disorder prediction 269 352 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0634 - - - 0.0