Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g0651 | ATGTTAGTTAGCATTATCTTTGTTCCCATTGGAGTTGCTACCTTGTTTGCTTCTAGGGATGTTGTTGAAATAATCGATCGTTATGAAACCGATTGTATACCAGAAAGATTTAGAGGCAACAAGGTTGGGTTCATACAGGGCCCCGAACCAAAAAATTGCAGCAGAAGAATAATTGTGACGAAACGTATGAAGCAACCAATATACGTCTATTACCAGCTGGACAATTTCTATCAGAATCACCGCAGATACGTGCAGAGTCGTAGTGATAAGCAATTGAGAGATGCTGGCAGCCAGCATGATACAGGCTCTTGCAAGCCTGAAGACAATGTGAACGGACAGCCAATCGTTCCTTGTGGTTTAATAGCATGGAGTTTGTTTAATGATACTTATACCTTCACCCTTAACAACAATCAAGTTGCTGTGAACAAGCGCGATATCTCGTGGAAGAGTGACCGGGAACACAAATTCGGGAAGAATGTATTTCCCAAAAACTTTCAGAATGGTACTCTGAGAGGTGGGAAAGTCCTTAATGAATCCATACCATTGAGTGAACAGGAGGATCTTATTGTGTGGATGCGAACTGCTGCTCTTCCCACATTTAGAAAGTTGTATGGAAAGATAGAGGTCGACCTTGAGCTAAACGATGTAATAGTTGTGAATTTGGAGAACCATTACAACACATACAGTTTTAACGGCAAGAAAAAGCTTGTGCTTTCTACAACTAGCTGGCTTGGTGGGAAGAATGACTTTCTTGGCATTGCTTATCTTATCGTCGGTGGGTTATGCTTCTTTTTGGCAATGGCTTTCACAGTCGTGTATCTTGTTAAGCCAAGGCGACTTGGAGACCCATCATATCTTTCATGGAATAGAAACCCAAGTGGGCACTGA | 888 | 41.89 | MLVSIIFVPIGVATLFASRDVVEIIDRYETDCIPERFRGNKVGFIQGPEPKNCSRRIIVTKRMKQPIYVYYQLDNFYQNHRRYVQSRSDKQLRDAGSQHDTGSCKPEDNVNGQPIVPCGLIAWSLFNDTYTFTLNNNQVAVNKRDISWKSDREHKFGKNVFPKNFQNGTLRGGKVLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEVDLELNDVIVVNLENHYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLIVGGLCFFLAMAFTVVYLVKPRRLGDPSYLSWNRNPSGH | 295 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 5791737 | 5793816 | - | Hsped.08g06510.1 | Hepe08g0651 | 576623 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g0651 | 295 | PIRSF | Lem3/Cdc50 | 1 | 291 | IPR005045 | GO:0016020(InterPro) | |
| Hepe08g0651 | 295 | MobiDBLite | consensus disorder prediction | 87 | 108 | - | - | |
| Hepe08g0651 | 295 | PANTHER | CELL CYCLE CONTROL PROTEIN 50 | 1 | 287 | IPR005045 | GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro) | |
| Hepe08g0651 | 295 | Pfam | LEM3 (ligand-effect modulator 3) family / CDC50 family | 15 | 279 | IPR005045 | GO:0016020(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g1068 | Hepe-Chr2:13250668 | Hepe08g0651 | Hepe-Chr8:5791737 | 3.47e-151 | dispersed | |
| Hepe04g2014 | Hepe-Chr4:74922138 | Hepe08g0651 | Hepe-Chr8:5791737 | 8.11e-122 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g0651 | K26935 | - | csv:101216400 | 533.872 |