Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0653 ATGGCGGTCGCTGCAAGAGCATTTCGATCAGTGGTGCGATCGAGCAGGCTCCCTCTTCTATCTCCATCTTCTTATGTGTTTGCTGCGCAGAAATCTCACTCTCACACTCTTCTCATTCGTCAGATGAGCTCGGAGGCTCAGAGTATCGCCGCTCGTCTTCAGAGTTCTGGATTGCTACGAAGCCAAGGCCTCATTGGCGGGAAGTGGATTGATGCTTATGATGGGAAGACCATGAAGGTTCATAATCCAGCCAATGGTGAAGTTATAACCAATGTCCCGCTCATGGGAAAAAGGGAGACCGATGATGCTATTTCTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAAGCGCTTACGTAAATGGTATGAGCTCCTAATTGCCCACAAAGAAGAGATTGGACAACTTATAACCTTAGAGCAAGGCAAACCCTTAACAGAAGCTGTGGGCGAGACTAACTATGGAGCCAGCTTCATCGAATACTTTTCTGAGGAAGCAAAACGAGTATATGGTGACATAATCTCACCAACTATAGCCGATCGTCGACTTTTTGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTGTTACCCCTTGGAACTTTCCGTTGGCTATGATTACACGGAAGGTTGGACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAACTTACCCCCTTGACAGCTTTAGCAGCAGCTGAGCTCTCACTTCAAGCTGGAATTCCCCCAGGTGTAGTGAATGTTGTTATGGGAGATGCTCCTGCTATTGGGGATGCTATACTTGCAAGTTCCCAGGTAAGAAAAATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAATTGATGGCAGGAGCTGCTGGGACTGTTAAAAGGGTGTCCTTAGAACTTGGTGGCAATGCACCTTGCATAATCTTTGATGACGCAGATGTGGATGTTGCAGTAAAAGGAGCTATTGCAGCGAAGTTTCGAAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTCTTGTTCAAGAAGGTATATACGAGAAATTTTCAAAGGCTTTCTCAAAAGCAGTGCAAAATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCTGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCATCACAAAGGGAGCAAAAGTTCTTCTTGGTGGTAAAAGACACAGCCTTGGAATGACATTTTTTGAACCTACAGTTATTACTGACGTGAAGAGTGACATGCTTTTATCCAGGGAGGAAGTATTTGGTCCCGTGGCACCCTTACTGCCATTCAAAACAGAGGAGGAAGCAATTGCTCTCGCTAATGACACCAATGCAGGATTAGCTGCTTACATATTCACAAATAATATTCAACGTTCATGGAGAGTGACTGAAGCTCTTGAATATGGAATGGTTGGAATTAATGAAGGCCTAATTTCTACAGAGGTGGCTCCATTTGGTGGCGTTAAACAGTCGGGCCTTGGTCGGGAAGGGTCGAAATATGGGCTCGACGAGTATCTTGAGCTGAAATATGTTTGCTTGGGGAATATGGACCGCAACTGA 1611 45.25 MAVAARAFRSVVRSSRLPLLSPSSYVFAAQKSHSHTLLIRQMSSEAQSIAARLQSSGLLRSQGLIGGKWIDAYDGKTMKVHNPANGEVITNVPLMGKRETDDAISSAYDAFKSWSKLTAADRSKRLRKWYELLIAHKEEIGQLITLEQGKPLTEAVGETNYGASFIEYFSEEAKRVYGDIISPTIADRRLFVLKQPVGVVGVVTPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSLELGGNAPCIIFDDADVDVAVKGAIAAKFRNSGQTCVCANRILVQEGIYEKFSKAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDAITKGAKVLLGGKRHSLGMTFFEPTVITDVKSDMLLSREEVFGPVAPLLPFKTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGINEGLISTEVAPFGGVKQSGLGREGSKYGLDEYLELKYVCLGNMDRN 536
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 5813364 5822057 + Hsped.08g06530.1 Hepe08g0653 576625
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0653 536 CDD ALDH_F5_SSADH_GabD 80 530 - -
Hepe08g0653 536 FunFam Succinate-semialdehyde dehydrogenase I 75 316 - -
Hepe08g0653 536 Pfam Aldehyde dehydrogenase family 69 528 IPR015590 GO:0016491(InterPro)
Hepe08g0653 536 FunFam Aldehyde dehydrogenase, putative 500 526 - -
Hepe08g0653 536 NCBIfam succinate-semialdehyde dehydrogenase 80 526 IPR010102 GO:0009013(InterPro)|GO:0009450(InterPro)
Hepe08g0653 536 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491(InterPro)
Hepe08g0653 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620(InterPro)
Hepe08g0653 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 75 522 IPR016162 GO:0016491(InterPro)
Hepe08g0653 536 SUPERFAMILY ALDH-like 58 534 IPR016161 GO:0016491(InterPro)
Hepe08g0653 536 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 53 533 IPR050740 GO:0004777(PANTHER)|GO:0006807(PANTHER)|GO:0009450(PANTHER)
Hepe08g0653 536 FunFam Succinate-semialdehyde dehydrogenase I 308 497 - -
Hepe08g0653 536 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1419 Hepe-Chr3:70918281 Hepe08g0653 Hepe-Chr8:5813364 7.48e-59 dispersed
Hepe08g0118 Hepe-Chr8:997473 Hepe08g0653 Hepe-Chr8:5813364 1.02e-36 dispersed
Hepe08g0653 Hepe-Chr8:5813364 Hepe09g0192 Hepe-Chr9:1523972 2.94e-108 dispersed
Hepe08g0652 Hepe-Chr8:5803528 Hepe08g0653 Hepe-Chr8:5813364 9.24e-264 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0653 K17761 - csv:101217352 925.62