Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0654 | ATGTTCCATGCTGCCAAGAAACCCTCCTCTATGACTTCTCATGACAGGCCAATGTGTGTCCAAGGAGATTCCGGTCTCGTCCTCACCACCGACCCCAAGCCCCGCCTCCGCTGGACCGTCGAGCTCCACGAGCGCTTCGTCGATGCCGTCACTCAGCTCGGAGGCCCCGATAAGGCCACTCCCAAGACCATCATGAGGGTTATGGGCGTCAAGGGCCTCACTCTCTACCATCTCAAGAGCCACCTCCAGAAGTTCAGACTCGGAAAACAACCGCACAAGGAATTCAATGATCAATCAATAAAAGATAGTATGAGAGCTTCAGCCTTAGAACTTCAGAGAAATAGTGGATCTTCTTCTGGTTTAATGGACCGTAGTATGAACGAAATGCAAATGGAGGTCCAGAGACGACTGCATGAACAAATTGAGGTACAAAGACACCTTCAATTGAGAATTGAGGCTCAAGGCAAGTACATGCAAAGCATATTGGAGAAAGCTTGCCAAACCCTCGCCGGTGAAAACATGGCCGCCGCGGCAGCCGCCGGACCTTTCAAAACCACTTCCAACAATATAGGAACAACCACCAATCTTGTTTCAGACGCCGCCATCAAAGACTTCATTTCACCTCCTCCACCACACACCTTCCCTCCTTTTCAAGACATCAACAACCTATTTACCTCCGAACCGCCGCCGCCTCCGCCGCCTCTCATCGACTGCCTCAAGAAGCCTAGCCCCTTCATCTCTGGCACCGGTAAGACCCCCATTTTCTGGCCGGACGATCTCCGGCTCCAGGACTTGGGAACCCCTCAGGCTACCCTAGCGCCACCGCCACCGTCCATAGGCGGCCCGACTGACTTGGACTCTCTCCAGCTGGAAATGTATGAATCTAAGCCACCGCCACCGTCATCCCTGCTCGCCATTGGCAACGACACGATGAATGAGAAGAAGTTCGACATGTCGTTAAAGCTTGAGAGACCGTCACCGCGGCAATCGTCCGGACATTCCGACGAAAGGGCGAATAATGGTATGCCTAACAATAACAACCCTACAATGTCACAGCCACAGGGAAGAAATTCTTCATTTGGTTAA | 1086 | 52.3 | MFHAAKKPSSMTSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDQSIKDSMRASALELQRNSGSSSGLMDRSMNEMQMEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAAAAAAGPFKTTSNNIGTTTNLVSDAAIKDFISPPPPHTFPPFQDINNLFTSEPPPPPPPLIDCLKKPSPFISGTGKTPIFWPDDLRLQDLGTPQATLAPPPPSIGGPTDLDSLQLEMYESKPPPPSSLLAIGNDTMNEKKFDMSLKLERPSPRQSSGHSDERANNGMPNNNNPTMSQPQGRNSSFG | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5829050 | 5832498 | + | Hsped.08g06540.1 | Hepe08g0654 | 576626 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0654 | 361 | Gene3D | - | 32 | 90 | - | - | |
Hepe08g0654 | 361 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 33 | 88 | IPR006447 | GO:0003677(InterPro) | |
Hepe08g0654 | 361 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 30 | 90 | IPR017930 | - | |
Hepe08g0654 | 361 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 9 | 185 | IPR046955 | GO:0003700(InterPro) | |
Hepe08g0654 | 361 | FunFam | Myb family transcription factor | 32 | 90 | - | - | |
Hepe08g0654 | 361 | MobiDBLite | consensus disorder prediction | 290 | 361 | - | - | |
Hepe08g0654 | 361 | MobiDBLite | consensus disorder prediction | 266 | 285 | - | - | |
Hepe08g0654 | 361 | SUPERFAMILY | Homeodomain-like | 32 | 88 | IPR009057 | - | |
Hepe08g0654 | 361 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Hepe08g0654 | 361 | Pfam | Myb-like DNA-binding domain | 35 | 85 | IPR001005 | - | |
Hepe08g0654 | 361 | Pfam | MYB-CC type transfactor, LHEQLE motif | 129 | 168 | IPR025756 | - | |
Hepe08g0654 | 361 | MobiDBLite | consensus disorder prediction | 324 | 361 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g1901 | Hepe-Chr6:70191849 | Hepe08g0654 | Hepe-Chr8:5829050 | 2.66e-21 | dispersed | |
Hepe08g0654 | Hepe-Chr8:5829050 | Hepe08g1728 | Hepe-Chr8:32126347 | 1.79e-32 | dispersed | |
Hepe05g1761 | Hepe-Chr5:67921590 | Hepe08g0654 | Hepe-Chr8:5829050 | 3.29e-46 | transposed | |
Hepe06g1815 | Hepe-Chr6:69246317 | Hepe08g0654 | Hepe-Chr8:5829050 | 5.58e-36 | transposed | |
Hepe02g0007 | Hepe-Chr2:242462 | Hepe08g0654 | Hepe-Chr8:5829050 | 5.40e-105 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56140 | PF00249 | Myb_DNA-binding | 1.90E-06 | CL0123 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0654 | - | - | - | 0.0 |