Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0660 ATGAGGTTGATGGCAATGACTTCTTTTTCTCTCCTCCTCCTCCTTCATCTTCATTTTGTCGTGGCGGTACCCGCCATTCAACCATTGATTGCTGCCGCCTCACGGGTTGGACGTGTGCAGCCGCCAGCAGCCTCTCTATTGTCGCACACATTTTACCAGCAGACATGCCCAGACGCTGAGGGCATCATTCATCGGAACGTGCAAGCTTGGATCGGGAAAGATTTCACCTTGGCTCCGGCCCTCATTCGTTTGCATTTCCACGATTGCGCTGTTAGGGGATGTGATGCATCGATTCTACTGTACGATCGTGGAACCGAAAGAAGGGCATACGTCAGCAACACCCTGAGGGGATTCCAAGTGATCGACGACATCAAGGCCGAGCTCGAGATAAAATGCCCCAAAATCGTCTCCTGCTCCGACATCCTCACCGCCGCCGCCAGAGACGCCACCCTTCTCGCCGGAGGTCCCTTCTGGGAGGTACCATTTGGCCGTAAAGACGGTAGAATCTCCATCGCCGCCGAAGCAGAGCGAGTCCCTCAAGGCCACGAAAACGTCACCGTTTTGATCGATTACTTCCGAAATCTAGGGCTGGAGGTTCTCGATTTGGTCGCCCTCTCCGGCGCACACACCATCGGCAGAGCTGCCTGTCACACCTTCAAAGACAGGCTCTACAATTTCAACGGGACCCGAAAACCCGACCCGGTCCTGAAACCTCCGTTTCTGAAATTTCTAAAGAGTCAGTGTAAGAACGATATGGAGCTGGTTTCTCTGGACGCGACGACGCCGAGAATGTTCGATACTGTTTACTACACGAATCTGGAGAATAAATTAGGGCTTCTGGCGACGGATCAAGCGTTGGTTTCGGATGACAGAACTTCTTCGTTTGTGGATTTGATGGCGAATCAACCGTTTCTTTTCGATAGCCAATTTTCGGCGTCGATGGTGAAATTGGGGAATGTGGGAGTGCTCACCAGGAAAAACGAAGGCGAAATTCGAGTCAATTGCAATTTCGTCAATCCCATAAGGAAGTAA 1032 51.74 MRLMAMTSFSLLLLLHLHFVVAVPAIQPLIAAASRVGRVQPPAASLLSHTFYQQTCPDAEGIIHRNVQAWIGKDFTLAPALIRLHFHDCAVRGCDASILLYDRGTERRAYVSNTLRGFQVIDDIKAELEIKCPKIVSCSDILTAAARDATLLAGGPFWEVPFGRKDGRISIAAEAERVPQGHENVTVLIDYFRNLGLEVLDLVALSGAHTIGRAACHTFKDRLYNFNGTRKPDPVLKPPFLKFLKSQCKNDMELVSLDATTPRMFDTVYYTNLENKLGLLATDQALVSDDRTSSFVDLMANQPFLFDSQFSASMVKLGNVGVLTRKNEGEIRVNCNFVNPIRK 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5913519 5915354 - Hsped.08g06600.1 Hepe08g0660 576632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0660 343 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 FunFam Peroxidase 50 190 - -
Hepe08g0660 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Hepe08g0660 343 FunFam Peroxidase 179 317 - -
Hepe08g0660 343 ProSiteProfiles Plant heme peroxidase family profile. 46 339 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 CDD secretory_peroxidase 47 338 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0660 343 Gene3D Peroxidase, domain 2 179 317 - -
Hepe08g0660 343 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 PANTHER PEROXIDASE 25-RELATED 44 335 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Hepe08g0660 343 Pfam Peroxidase 65 301 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 SUPERFAMILY Heme-dependent peroxidases 47 340 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0660 343 Gene3D - 50 339 - -
Hepe08g0660 343 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0660 Hepe-Chr8:5913519 Hepe09g0681 Hepe-Chr9:6453315 1.90e-74 dispersed
Hepe07g2075 Hepe-Chr7:65023743 Hepe08g0660 Hepe-Chr8:5913519 2.79e-109 transposed
Hepe09g0986 Hepe-Chr9:10111066 Hepe08g0660 Hepe-Chr8:5913519 1.57e-65 transposed
Hepe04g1231 Hepe-Chr4:67683678 Hepe08g0660 Hepe-Chr8:5913519 1.23e-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0660 K00430 - csv:101204209 532.717