Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0662 ATGTCGCCCATTTCCCATTTTTTAATCTTTTTCTTCTTCTTCTTCTTCCTCTTCTTTCTCTCTGTTCCCGTCGCATTCGGCGACAATGACGACACTCAACAATTAGAGTCTGTGAAGCTCGATCTGTTGCATCGCCACCATCCAAAAGTCGCCGAGCAGCTTCACGGCGATATGAAGTCGGCTGTTCAAGGAATAAACGATCGCTTGAAGGATATTCACGATCACGACAACAAGCGCCACCGTTCGATCTCGGCGTCGCTGAATAGGAAAGAAATTGAGGAGAAAACCGCGGCGGAGAAGGAGGTAGAGGAGAAGGAGAAAGAAGCAGAGGCAGCGGCGAGGAAGGAGATGGAGGATTCCGGTTATCCATTTCCTCCGACGTCGCCGACGCCGATAGGGATGAAAATGATATCGGGAGCCGATTTCGGAAGTAGTGAGTATTTTGTGCAATTGAAAGTGGGAACGCCGCCGCAGACGTTCATGTTGATTGCCGATACTGGTAGTGACCTAACGTGGATTAAATGTAGATATCGGCGGTGTGTCGGAAACTGCAGCACCAACGCCATTCATCGAAACCGTAACAGACGGAAAATAGGATTCAAAAGGGCGTTTTTGGCGAATCGATCTACTTCTTTCAAGACGGTTGATTGCAACTCCGATGAGTGTAAAAGACAGTTTTCCGATCTCTTTTCCACAAGTACATGCGAATCCGCTAACAGCCCTTGTCGCTATGATTATAGTTACTCAGGTGGAGCAAGTGCAAAGGGAATATTTGCAAGGGAGACCATAACGGTATGTTTGACAAACGGTAAAGAAAAACAACTGACTGACTCAATAATAGGCTGCACAGAATCAGCTCTGGGGAAAATCTTCGGCGGAGCCGACGGCGTGATTGGCTTAGGCTCGAGCCCCTACTCCTTCCCTTTCAAAGCCGCCGAAAACGCCAACGGCGGCGGCTTCGCCTACTGCCTCGTCGACCACCTCAGCGACCAAACCGCCACCAGCTACTTCATCCTCGGCGGCGCAAACGCCCAATCCTCCTCTGCAACCTCCTCCGTAACGCCCTCCGGCAACATGTCATACACAAGGCTCTTCATCGGAGAGGCCTTCAGCAGCTTCTACGGCGTCGTCCTCAACGGAATCTCCGCGGACGGCGTGATGCTCAACATCCCACCACGCGTTTGGGATATCAACGCCGGCGGAGGGACGATCATCGACTCCGGCACCAGCCTGACGATGCTGGCGGCGCCGGCGTTCGAAATGGTGTTGGAAGCCGTGATTCCGAAGCTGAAGAACTTCGAGAGAATTTTAATGGAACCATTCGAATATTGCTTCAACAGCAGCCAATACACCGACGATATGGCCCCACGGCTGCGATTCCATTTCTTCGACGGCGCTGTGTTCGAGCCGCCGACGAAAAGCTACATTATTTCGGTCGGTGATAATCTTAACTGTGTTGGGTTCGTTTCTATGGCTTTTCCGGCCACCAGTATCATTGGGAATATCCTCCAGCAAAACCACCTTTGGCAATATGATTTCAATGTTCAAAAGATCGGTTTTGCTCCTTCTCAATGCGTCTAG 1581 50.79 MSPISHFLIFFFFFFFLFFLSVPVAFGDNDDTQQLESVKLDLLHRHHPKVAEQLHGDMKSAVQGINDRLKDIHDHDNKRHRSISASLNRKEIEEKTAAEKEVEEKEKEAEAAARKEMEDSGYPFPPTSPTPIGMKMISGADFGSSEYFVQLKVGTPPQTFMLIADTGSDLTWIKCRYRRCVGNCSTNAIHRNRNRRKIGFKRAFLANRSTSFKTVDCNSDECKRQFSDLFSTSTCESANSPCRYDYSYSGGASAKGIFARETITVCLTNGKEKQLTDSIIGCTESALGKIFGGADGVIGLGSSPYSFPFKAAENANGGGFAYCLVDHLSDQTATSYFILGGANAQSSSATSSVTPSGNMSYTRLFIGEAFSSFYGVVLNGISADGVMLNIPPRVWDINAGGGTIIDSGTSLTMLAAPAFEMVLEAVIPKLKNFERILMEPFEYCFNSSQYTDDMAPRLRFHFFDGAVFEPPTKSYIISVGDNLNCVGFVSMAFPATSIIGNILQQNHLWQYDFNVQKIGFAPSQCV 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5934431 5936186 - Hsped.08g06620.1 Hepe08g0662 576634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0662 526 Coils Coil 88 119 - -
Hepe08g0662 526 Pfam Xylanase inhibitor C-terminal 374 521 IPR032799 -
Hepe08g0662 526 Gene3D Acid Proteases 344 526 IPR021109 -
Hepe08g0662 526 PANTHER OS07G0603500 PROTEIN-RELATED 20 522 IPR051708 -
Hepe08g0662 526 Pfam Xylanase inhibitor N-terminal 147 341 IPR032861 -
Hepe08g0662 526 SUPERFAMILY Acid proteases 139 525 IPR021109 -
Hepe08g0662 526 CDD pepsin_A_like_plant 146 525 IPR034161 -
Hepe08g0662 526 PRINTS Pepsin (A1) aspartic protease family signature 403 414 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Hepe08g0662 526 PRINTS Pepsin (A1) aspartic protease family signature 497 512 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Hepe08g0662 526 PRINTS Pepsin (A1) aspartic protease family signature 153 173 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Hepe08g0662 526 ProSiteProfiles Peptidase family A1 domain profile. 147 521 IPR033121 -
Hepe08g0662 526 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 162 173 IPR001969 GO:0004190(InterPro)|GO:0006508(InterPro)
Hepe08g0662 526 MobiDBLite consensus disorder prediction 70 129 - -
Hepe08g0662 526 Gene3D Acid Proteases 129 340 IPR021109 -
Hepe08g0662 526 MobiDBLite consensus disorder prediction 70 117 - -
Hepe08g0662 526 FunFam Aspartyl protease family protein 356 526 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2198 Hepe-Chr2:61427566 Hepe08g0662 Hepe-Chr8:5934431 2.71e-65 dispersed
Hepe08g0662 Hepe-Chr8:5934431 Hepe08g1169 Hepe-Chr8:11964144 2.66e-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0662 - - - 0.0