Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0666 ATGATACTACGCTCACAATCGTCCTCTGTTTTCACGATTTCCTCTACAGTTACCGATAATCACACGTATAAGTATCACCGGCGGCAACTTCAGCTTCGTGATTACGCCGATGGAGCTAGTTTTCATGGTCGTGTTTGTAAATTGTTACCTCCAATGGCGGCGGTCGCAGCCGCTTCCAGCGGCGGAAGTCTAGCTAGAAGGAAATCTAGGAATCGTTTCATCAACGTTAGGTCTTCTGCAACTGTCTCCGATTTGTCCTCCTCGAATCAGCCGCCGGATGTTCCAACGCCAGGTTTAGGTCCAGATAAGAATGAGGAAGTTCAGAGGCCTGGACCTGATCCGAAAATGCTTCTGAAGAGGTTTTGGAAAGTTGCCAAACCTTATTGGTTCTCGGATGACAAAGTGCAAGCTCGATGGCAACTGGCTGCTGTCTTCGCTCTGTCCTTGGGCACCACCGGCATCAGCGTTGGCTTCAATTTCCTCGGCCGCGACTTCTTTAACGCTCTTGCTAATAAGGATCAAGAACAGTTCAGTAAGCAACTCCTCTACTACCTAGGTGCCTTTGCTGGAGGTATTCCGGTTTTTGTATTGAGAGATTATGCGAAGGACATGCTTTCCCTTAGATGGAGGTCATGGATGACTAAATATTACATGGAGCGTTATCTAAAGAACCAGTCTTTCTATAAAATTCAGTCCCAATCCATTATTGATAATCCAGACCAGCGGATTGTTGATGATCTCAGTGCTTTCACAGGGACAGCTCTTTCGTTTTCTTTAGCACTTTTCAATTCTACAGTGGATTTAATTTCATTTAGTAACATCTTATTTGGTATCTATCCACCGTTGTTTGTTGTTCTTCTTTTATATTCGATTGGAGGAACGGCAATTAGTGTTTTCCTTGGAAAGGGTTTGGTTAATCTAAACTTCTTGCAAGAAAAGAAAGAAGCAGATTTTCGCTATGGACTTGTTCGCATTCGTGAAAATGCTGAGTCGGTTGCTTTCTATGGTGGTGAAGAGAATGAGATGCAGCTTATTCTGCAGCGTTTCAGAAGTGCTGTTGAGAATTTAACTAAATTACTAATAGCATCCAGAAATCTTGAGTTCTTTACCAGTGGCTACCGCTACCTCATTCAGATTCTTCCAGCTGCCGTTGTTGCCCCAATGTTCTTTTCGGGGAAAATTGAGTTTGGTGTTATTAATCAATCAGTATCTGCTTTTAATCACATCCTTGGGGATTTTTCGCTCATTGTATACCAGTTTCAGTCCATCAGTGCTTTTTCAGCAATTATTGATCGCCTAGGTGAATTTGATGACCTCTTGGATGGAAGTGCCCCTAATGTTCTCTCTAACACCTCAGAAGAAATACATCTCATGTACTCCCATATGGAAACTTCGCCTCTGTTAGAATCAAATGGGTCCATGGACCTAGACAGAGGTCAGAAATTATTGGAGATTGAGAATTTGACTTTAGGGGCACCAAATGGAGCTATTTTGGTCAGAGACTTGGCATTAATAGTTCAAGAGAAGGAGCATTTGCTGGTAATGGGACCTAGTGGATGTGGCAAGACTTCTTTGTTAAGAGTTTTGGCAGGTCTTTGGAATGTTGGAAAAGGAAAAATCACATTTTATATAAAAGACTATCCCGAGCAGCTAGTTTCTCAAAATGGAGTGTCCACCGAAGCACATACAGGAAAAGATGTATCGGAAGAAAATAGTAGACCACTCAACAAAAATTATCAAGGGATATTTTTCCTTCCTCAAAGACCGTACATGGTTTTGGGTACACTACGTCAGCAACTGCTTTATCCTACATGGGCTGAAGGTGCAGTCACATCAGGTTATGCTGAACCAAATGTATTCCCTTCCTTTTTGACGGGTGCATCAAATATCAACAATGTTAGTGAAAATCCCGATAAGCCAACAACGGATGACCTAATCCAGGTTCTGGATAAAGTGGGTCTTGGCTACCTATTGACTCGTTTCAGTAGTCTGGACATAACTTGTGAATGGTCCAGTGTTCTTTCTCTCGGTGAGCAGCAACGTATTGCTTTTGCACGTCTATTGCTTTCAAGACCAAAGTTAGTCCTGTTGGATGAGTCTACAAGTGCTTTAGATGAAGAAAATGAGGCTCGTTTATACAAGCAAATTGCAGCTGCTGGAATAACATATATTAGCATTGGCCATCGACGAACTTTGCGTAATCACCATAACAATATGTTGCATATATCCAAGTTATCTAGTGGCAATGAACGCAATTGGAATATTGAACCCATTATTCGTGATGATTTGTACGAATTATCGAAGCAGTGA 2310 42.03 MILRSQSSSVFTISSTVTDNHTYKYHRRQLQLRDYADGASFHGRVCKLLPPMAAVAAASSGGSLARRKSRNRFINVRSSATVSDLSSSNQPPDVPTPGLGPDKNEEVQRPGPDPKMLLKRFWKVAKPYWFSDDKVQARWQLAAVFALSLGTTGISVGFNFLGRDFFNALANKDQEQFSKQLLYYLGAFAGGIPVFVLRDYAKDMLSLRWRSWMTKYYMERYLKNQSFYKIQSQSIIDNPDQRIVDDLSAFTGTALSFSLALFNSTVDLISFSNILFGIYPPLFVVLLLYSIGGTAISVFLGKGLVNLNFLQEKKEADFRYGLVRIRENAESVAFYGGEENEMQLILQRFRSAVENLTKLLIASRNLEFFTSGYRYLIQILPAAVVAPMFFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQSISAFSAIIDRLGEFDDLLDGSAPNVLSNTSEEIHLMYSHMETSPLLESNGSMDLDRGQKLLEIENLTLGAPNGAILVRDLALIVQEKEHLLVMGPSGCGKTSLLRVLAGLWNVGKGKITFYIKDYPEQLVSQNGVSTEAHTGKDVSEENSRPLNKNYQGIFFLPQRPYMVLGTLRQQLLYPTWAEGAVTSGYAEPNVFPSFLTGASNINNVSENPDKPTTDDLIQVLDKVGLGYLLTRFSSLDITCEWSSVLSLGEQQRIAFARLLLSRPKLVLLDESTSALDEENEARLYKQIAAAGITYISIGHRRTLRNHHNNMLHISKLSSGNERNWNIEPIIRDDLYELSKQ 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5961984 5971630 + Hsped.08g06660.1 Hepe08g0666 576638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0666 769 SMART AAA_5 508 746 IPR003593 GO:0016887(InterPro)
Hepe08g0666 769 Gene3D - 472 748 IPR027417 -
Hepe08g0666 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 475 741 IPR027417 -
Hepe08g0666 769 SUPERFAMILY ABC transporter transmembrane region 115 436 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Hepe08g0666 769 MobiDBLite consensus disorder prediction 80 112 - -
Hepe08g0666 769 CDD ABCD_peroxisomal_ALDP 483 744 - -
Hepe08g0666 769 Pfam ABC transporter transmembrane region 2 130 390 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Hepe08g0666 769 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 142 425 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Hepe08g0666 769 ProSitePatterns ABC transporters family signature. 674 688 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe08g0666 769 Pfam ABC transporter 500 702 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe08g0666 769 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 483 769 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe08g0666 769 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 88 756 IPR050835 -
Hepe08g0666 769 Gene3D ABC transporter type 1, transmembrane domain 102 439 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0609 Hepe-Chr7:6678111 Hepe08g0666 Hepe-Chr8:5961984 1.28e-47 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0666 - - - 0.0