Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0676 ATGAAGTTCTGTTCAGCATCAGTGCTTTCTCTGTTTTTTGTTATTATTAATCTACTTCACCTTGCCATCGCCGACCTGAAATCAGACAAGCAAGCTCTTCTCGACTTTGCCTCTTCTGTTCCACATCGTCGAAGCCTCAACTGGAACGATACTACATCCATATGCACATCTTGGGTTGGCATTACTTGCAGTGCAGATGGAACTCGTGTTCTTACCCTCCGACTACCTGGGATTGGACTCATCGGTTCAATTCCTCCTAACACTCTAGGGAAACTTGATGGCCTCAAGATTCTCAGTCTTCGTTCCAACCTCCTTAACGGAAAAATACCGTCTGATATTACCTCACTTCCTTCACTCCAATATCTTTATCTCCAACATAATAACTTCTCTGGTTACTTTCCTTCCTCCCTTTCGCCTACACTTAATGTATTGGATCTATCATTCAATTCATTAGAAGGAAAGATTTCAAAGACTATTCAGAATTTGACACAACTAACTGGATTGAACCTCCAGAACAACAATATTTCTGGTTCTATACCAGATATCAACCTCCCTAAGCTCAAGCATTTTAATATAAGTTATAACCATCTTAACGGTTCAATCCCAATATTTTTTAAGACATTCCCAAATTCATCCTTCATTGGAAATCCTTCATTATGTGGATTGCCTCTAAAAGCTTGCTCCATAGTCCTATCTCCAGCTCCTGATGCTCCACCTTCACCTGCCATTTCTCAAAAGCAGAGCTCCAAAAAACTGAAGATGGGAGTTATCATTGCTATTGCAGTTGGTGGATTTTTCCTTCTATTCCTTGTAGTTCTTTTTGTGGTTTTGTGCTGTTTAAAGAAGAAGGACGGTGGAGGCGCCGATGCAAGAAAAGGGAAGGTTTCTGGTGGTGGGAGAAGTGAAAAACCGAAAGAGGAATTCGGAAGTGGTGTGCAGGAGCCTGAGAAAAACAAGCTGGTGTTTTTTGATGGCTGTTCATTTAATTTTGATCTTGAAGACCTATTAAGGGCGTCAGCGGAAGTGCTTGGAAAGGGCAGCTATGGAACAGCTTATAAAGCTGTCCTGGAGGAACCTACCACTGTTGTGGTGAAAAGATTGAAGGAAGTGGTGGTGGGGAAGAGGGAATTTGAACAACAGATGGACATAGTTGGAAGGGTCGGGCAGCACCCGAATGTCATGCCACTCCGAGCGTATTATTACTCAAAGGATGAAAAGCTCCTTGTTTATGATTATGTCCCAGGAGGCAGCTTGTCATCACTCTTGCATGGAAACAGAGGAGGGGAAAGAACTCCACTTGACTGGGACTCAAGAGTGAAAATTGCTCTTGCAGCAGCAAAGGGAATTGCTCATATTCATACAGTGGGTGGTCCAAAATTCACCCATGGAAATATCAAGGCCTCAAATGTTCTCCTAAATCAAGATGTCAATGCTTGTGTCTCTGACTTTGGCCTTACCCCTCTTATGAATGTCCCAACTTCTCGAACTGCAGGTTATCGTGCGCCCGAGGTGATCGAAGCTCGCAAACACACACACAAGTCAGATGTTTACAGCTTCGGCGTTCTTCTTCTCGAAATGTTAACTGGAAAAGCTCCCATCCAATCACCTGGTCGTGACGAAATGGCCGATCTTCCTCGGTGGGTCCAGTCGGTTGTGAGGGAGGAATGGACGGCTGAGGTTTTCGATGTTGAGCTAATGAGGTACCAGAATATTGAAGAAGAGATGGTGCAGATGTTGCAAATAGCAATGACTTGTGTAGCGAAGTTGCCCGACATGAGACCGAACATGGACGAAGTAGTTAGAATGATCGAAGAAATCCGGCAATCTGACTCGGAGAACCGGCCATCTTCCGAAGAGAACAAATCCAAGGACTCCAATGTGCAGACCCCATGA 1893 44.11 MKFCSASVLSLFFVIINLLHLAIADLKSDKQALLDFASSVPHRRSLNWNDTTSICTSWVGITCSADGTRVLTLRLPGIGLIGSIPPNTLGKLDGLKILSLRSNLLNGKIPSDITSLPSLQYLYLQHNNFSGYFPSSLSPTLNVLDLSFNSLEGKISKTIQNLTQLTGLNLQNNNISGSIPDINLPKLKHFNISYNHLNGSIPIFFKTFPNSSFIGNPSLCGLPLKACSIVLSPAPDAPPSPAISQKQSSKKLKMGVIIAIAVGGFFLLFLVVLFVVLCCLKKKDGGGADARKGKVSGGGRSEKPKEEFGSGVQEPEKNKLVFFDGCSFNFDLEDLLRASAEVLGKGSYGTAYKAVLEEPTTVVVKRLKEVVVGKREFEQQMDIVGRVGQHPNVMPLRAYYYSKDEKLLVYDYVPGGSLSSLLHGNRGGERTPLDWDSRVKIALAAAKGIAHIHTVGGPKFTHGNIKASNVLLNQDVNACVSDFGLTPLMNVPTSRTAGYRAPEVIEARKHTHKSDVYSFGVLLLEMLTGKAPIQSPGRDEMADLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMTCVAKLPDMRPNMDEVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6049883 6054625 - Hsped.08g06760.1 Hepe08g0676 576648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0676 630 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Hepe08g0676 630 SUPERFAMILY L domain-like 39 225 - -
Hepe08g0676 630 Pfam Protein tyrosine and serine/threonine kinase 341 602 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0676 630 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 413 618 - -
Hepe08g0676 630 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Hepe08g0676 630 Gene3D Phosphorylase Kinase; domain 1 306 412 - -
Hepe08g0676 630 CDD STKc_IRAK 343 606 - -
Hepe08g0676 630 SUPERFAMILY Protein kinase-like (PK-like) 341 604 IPR011009 -
Hepe08g0676 630 PANTHER OS05G0588300 PROTEIN 12 620 IPR050994 -
Hepe08g0676 630 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Hepe08g0676 630 MobiDBLite consensus disorder prediction 285 311 - -
Hepe08g0676 630 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515(InterPro)
Hepe08g0676 630 Pfam Leucine Rich Repeat 165 181 IPR001611 GO:0005515(InterPro)
Hepe08g0676 630 Pfam Leucine Rich Repeat 186 206 IPR001611 GO:0005515(InterPro)
Hepe08g0676 630 FunFam pollen receptor-like kinase 1 305 412 - -
Hepe08g0676 630 Gene3D Ribonuclease Inhibitor 22 83 IPR032675 -
Hepe08g0676 630 Gene3D Ribonuclease Inhibitor 84 230 IPR032675 -
Hepe08g0676 630 Pfam Leucine rich repeat 81 129 IPR001611 GO:0005515(InterPro)
Hepe08g0676 630 MobiDBLite consensus disorder prediction 605 630 - -
Hepe08g0676 630 ProSiteProfiles Protein kinase domain profile. 337 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0676 630 ProSitePatterns Protein kinases ATP-binding region signature. 343 374 IPR017441 GO:0005524(InterPro)
Hepe08g0676 630 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515(InterPro)
Hepe08g0676 630 MobiDBLite consensus disorder prediction 605 621 - -
Hepe08g0676 630 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0672 Hepe-Chr4:60200021 Hepe08g0676 Hepe-Chr8:6049883 7.94e-232 dispersed
Hepe05g0055 Hepe-Chr5:571051 Hepe08g0676 Hepe-Chr8:6049883 2.74e-73 dispersed
Hepe06g1498 Hepe-Chr6:65559262 Hepe08g0676 Hepe-Chr8:6049883 3.00e-154 dispersed
Hepe07g0100 Hepe-Chr7:950420 Hepe08g0676 Hepe-Chr8:6049883 5.89e-146 dispersed
Hepe08g0676 Hepe-Chr8:6049883 Hepe08g2570 Hepe-Chr8:67362052 1.31e-167 dispersed
Hepe05g0329 Hepe-Chr5:4056429 Hepe08g0676 Hepe-Chr8:6049883 4.73e-109 transposed
Hepe04g1261 Hepe-Chr4:68140587 Hepe08g0676 Hepe-Chr8:6049883 1.70e-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73035 PF00069 Pkinase 1.50E-36 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0676 - - - 0.0