Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0678 ATGGATCTCCTCCTCCTGGAGAAGACGCTGATCGGCCTCTTCGTCGCGGTGGTTCTAGCCATCGCCATTTCCAAACTCCGCGGCAAGCGATTCAAGCTTCCGCCAGGTCCGTTACCGGTGCCGATCTTCGGTAACTGGCTCCAGGTCGGCGATGACTTGAACCACCGAAATCTGACGGATCTCGCCAAGAAATTCGGCGATATCTTCTTGCTACGGATGGGACAGAGGAACCTCGTGGTGGTTTCCTCGCCGGAACTGGCTAAGGAAGTGCTCCACACGCAGGGAGTCGAGTTTGGATCTCGAACCAGAAACGTCGTCTTCGATATCTTCACCGGAAAAGGTCAGGATATGGTTTTCACCGTCTATGGTGAGCACTGGAGGAAAATGAGACGGATCATGACGGTTCCGTTTTTCACGAATAAAGTTGTCCAGCAATACCGTTACGGATGGGAGGCCGAGGCCGCAGGTGTGGTGGAGGACGTGAAGAAGAATCCTGAATCGGCGACGACCGGAATCGTTCTCCGGCGCCGGTTGCAGCTTATGATGTACAACAATATGTACAGGATCATGTTCGATCGAAGATTCGAAAGTGAAGATGATCCTCTGTTTAACAAACTCAAGGCTCTGAACGGAGAGAGGAGCCGATTGGCGCAGAGCTTCGATTACAACTATGGCGATTTCATCCCGATCTTGAGACCGTTCTTGAGAGGATATCTCAAAATCTGCAAGGAAGTTAAGGAAACGAGGCTCAAACTCTTCAAGGATTATTTCGTCGAGGAGAGGAAGAAACTGGCGAGCACGAAGAGCACCACGAACGAGGGATTGAAATGTGCTATTGATCATATATTGGATGCGCAACAGAAAGGAGAAATCAACGAAGACAATGTGCTTTACATTGTTGAGAATATTAATGTTGCAGCAATTGAAACAACACTATGGTCAATCGAATGGGGAATTGCTGAGCTAGTGAACCACCCTGAAGTCCAAACTAAGTTGAGGAATGAACTCGACACTCTACTAGGACCCGGTGTCCCGATAACCGAGCCCGACACTTACAAGCTCCCTTACCTCCAGGCCGTTATCAAGGAGACCCTTCGCCTTCGCATGGCCATCCCATTGCTCGTGCCCCACATGAACCTCCACGACGCCAAGCTCGGTGGCTTCGACATTCCTGCTGAGAGTAAGATCTTAGTCAATGCCTGGTGGTTAGCCAACGACCCTGCAAACTGGAAGAACCCCGAAGAGTTCCGCCCCGAGAGGTTCTTGGAAGAGGAATCGAAGGTCGAGGCCAATGGCAATGATTTCAGATACCTCCCCTTCGGTGTCGGTAGAAGGAGTTGCCCTGGTATCATCTTGGCTTTGCCAATCCTTGGAATTACGATTGGGCGTTTGATTCAAAATTTCGAGCTACTTCCTCCTCCTGGACAGAAGAAGTTGGATACTTCAGAGAAAGGTGGGCAATTTAGCTTGCACATTTTGAAGCATTCCACCATTGTTGCTAAACCGAGGGCATTCTAG 1518 50.07 MDLLLLEKTLIGLFVAVVLAIAISKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAAGVVEDVKKNPESATTGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFNKLKALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKICKEVKETRLKLFKDYFVEERKKLASTKSTTNEGLKCAIDHILDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEVQTKLRNELDTLLGPGVPITEPDTYKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANDPANWKNPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLIQNFELLPPPGQKKLDTSEKGGQFSLHILKHSTIVAKPRAF 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6087622 6091402 + Hsped.08g06780.1 Hepe08g0678 576650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0678 505 Gene3D Cytochrome P450 27 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 CDD CYP73 63 496 - -
Hepe08g0678 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 FunFam Trans-cinnamate 4-monooxygenase 23 497 - -
Hepe08g0678 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe08g0678 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 504 - GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER)
Hepe08g0678 505 Pfam Cytochrome P450 34 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g0678 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0678 Hepe-Chr8:6087622 Hepe09g0266 Hepe-Chr9:2276106 9.38e-75 dispersed
Hepe10g1390 Hepe-Chr10:50253681 Hepe08g0678 Hepe-Chr8:6087622 8.46e-310 wgd
Hepe04g1276 Hepe-Chr4:68311447 Hepe08g0678 Hepe-Chr8:6087622 5.13e-60 wgd
Hepe08g0678 Hepe-Chr8:6087622 Hepe08g1164 Hepe-Chr8:11887878 1.90e-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0678 K00487 - csv:101221846 967.222