Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0683 | ATGTTGAAGAATACTCGAGCTGGGAATTCTAGCAGCAACCTCCATGATTGCAAATCGGAATTTGGGTACGTTGAGACCGATCCGACATGTCGTTACGGCCGTTTTGAAGAAGTTTTGGGAAAAGGGGCCATGAAGACAGTGTACAAAGCCATTGATGAGTTTCTTGGAATAGAGGTGGCCTGGAGTCAGGTGAAACTCAACGAAGTCCTCCGATCGCCCGAGGATTTGCAGCGGTTGTATTCGGAGGTTCACTTACTTAGCACACTTAAGCATGATTCAATCATGCAATTCTACACCTCTTGGATCGACGTCGATCGCAAAACCTTCAACTTCATTACCGAACTGTTTACTTCGGGAACACTCAGAGAATATGGGAAGAAATATAGGCAGGTCGATATCAGAGCCATTAAGAGCTGGGCGCGCCAGATCCTGCAGGGGCTCGTTTATTTGCATGAACACGATCCTCCGATAATACACCGAGATTTGAAGTGTGATAATATCTTTGTAAATGGCCATCTTGGGCAAGTCAAGATTGGTGATTTGGGGCTTGCAGCTATACTCCATGGTTCCAAATCTGCTCACAGTGTTATAGGCACACCGGAGTTTATGGCGCCGGAATTATACGAGGAGGATTACAATGAGCTAGTTGATGTCTACTCGTTTGGCATGTGTGTTATGGAGATGCTTACTTCTGAGTATCCGTATAGCGAGTGTTCTAATCCTGCACAGATTTACAAGAAAGTCACGTCGGGGAAGCTGCCAGCAGCATTGTACAAGATTCAAGACATGGAAGCGCAGAGATTTGTTAAGAAATGCTTGGTTCCGGTTTCGATGAGGGCGTCTGCAAAGGAACTCTTGGTTGATTCTTTTCTCATGGTTGATGGCGATAGACCTTTGTTGAGGGAGAGGAATCAAAACCAGAAGCCATTTCTAAATGCCAAAGAGATGGAGAAATTGCACTTAGGTGAAGGTTTAAGCAGGACGAACATGACAATCACGGGGAAGCTGAACCCCGAAGACAATACCCTCTTTCTCCGAGTTCAGACTGCAGATAAAGATGGCTCTCTTAGGAACATATACTTCCCCTTCGACATAGTGAACGACACAGCATTAGATGTGGCGATGGAGATGGTGAAAGAGTTGGAAATCTCTGATTGGGAGCCTTTCGAAATAGCGGACATGATCGAAGGAGAGATATCGGCTCTGGTTCCAAACTGGAATAGGAGTGATTTATCCAACCATAGCCTCAGCTTCAGCTATGCAGAAGAAGATGATGATGCACCTCATCATACTTTTCGCTCCGTCTCCTCGTCATCCCAAGCAACAACTTTCGGGCTCGTCACCTCCCCAAGAACAAATCAAAACATATCAGATGGTTTTAGTTGGTTCCCAGATGATGTGCTTGACGATAGCAGTTCACAATGCTCGTCGGCATCGGGAAAATACTCCAACTTGAATTACATCAGCAGCGACGAGTACGAGACCAATATGAGTTCGGTCCGAATAGATCAACATAACAACATCAATAAGATTCACAACTCCTCGAGATTTTGTCCCATTGAGAATCGCAACAACAAGGATTTCTTGGCTGGACTTTTATACAAGCAGAGCCAATGTGCGGTAGGGTCATCTCAAGGAGCTGCTTCTGGTCGCAAAGACAAGAGGGCAACGGATGGCCGTAGTTTAACAAGAAACAGATCACTCGTTGATGTACATAGCCAATTGCTGCATCGTTCGTTGGTCGAGGAAGTGAATAGAAGACGGTTATTCAAGACGGTTGGAGCGGTCGAAAGCATCGGTTTTCAAGCACCTTGTGAGGTTTCTACCAGCAAAAGGGTCTCGAGTAGGCAATCGATCGGGAACCGAAGTAGCGATGTAGGGAGAACGAGGAGAAATGACGATGTTAGGCAAGATGTTGGAAGGAGAACATGA | 1932 | 45.81 | MLKNTRAGNSSSNLHDCKSEFGYVETDPTCRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPEDLQRLYSEVHLLSTLKHDSIMQFYTSWIDVDRKTFNFITELFTSGTLREYGKKYRQVDIRAIKSWARQILQGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSKSAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVMEMLTSEYPYSECSNPAQIYKKVTSGKLPAALYKIQDMEAQRFVKKCLVPVSMRASAKELLVDSFLMVDGDRPLLRERNQNQKPFLNAKEMEKLHLGEGLSRTNMTITGKLNPEDNTLFLRVQTADKDGSLRNIYFPFDIVNDTALDVAMEMVKELEISDWEPFEIADMIEGEISALVPNWNRSDLSNHSLSFSYAEEDDDAPHHTFRSVSSSSQATTFGLVTSPRTNQNISDGFSWFPDDVLDDSSSQCSSASGKYSNLNYISSDEYETNMSSVRIDQHNNINKIHNSSRFCPIENRNNKDFLAGLLYKQSQCAVGSSQGAASGRKDKRATDGRSLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSTSKRVSSRQSIGNRSSDVGRTRRNDDVRQDVGRRT | 643 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6155648 | 6159752 | + | Hsped.08g06830.1 | Hepe08g0683 | 576655 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0683 | 643 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 114 | - | - | |
Hepe08g0683 | 643 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 294 | - | - | |
Hepe08g0683 | 643 | MobiDBLite | consensus disorder prediction | 610 | 643 | - | - | |
Hepe08g0683 | 643 | FunFam | Probable serine/threonine-protein kinase WNK1 | 18 | 114 | - | - | |
Hepe08g0683 | 643 | MobiDBLite | consensus disorder prediction | 610 | 625 | - | - | |
Hepe08g0683 | 643 | FunFam | probable serine/threonine-protein kinase WNK9 | 116 | 296 | - | - | |
Hepe08g0683 | 643 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 292 | IPR011009 | - | |
Hepe08g0683 | 643 | ProSiteProfiles | Protein kinase domain profile. | 33 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0683 | 643 | CDD | STKc_WNK | 31 | 291 | - | - | |
Hepe08g0683 | 643 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 157 | 169 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe08g0683 | 643 | SMART | serkin_6 | 33 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0683 | 643 | Pfam | Protein kinase domain | 36 | 290 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0683 | 643 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 19 | 599 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Hepe08g0683 | 643 | MobiDBLite | consensus disorder prediction | 626 | 643 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g0683 | Hepe-Chr8:6155648 | Hepe09g1530 | Hepe-Chr9:40128449 | 2.54e-154 | dispersed | |
Hepe08g0683 | Hepe-Chr8:6155648 | Hepe04g0687 | Hepe-Chr4:60420509 | 3.88e-203 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73036 | PF00069 | Pkinase | 3.10E-46 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0683 | K08867 | - | csv:101203757 | 1173.69 |