Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0687 ATGGCGATTACTACTTCTCACACTCCAAAAACTAAAGTGCTTTTGGTCTTAGCTTTGCATCTCTTCCTTTTTATAAGCAGTTCTTCAGCCCAGCTCTCCACTGCCTTCTACTCCAAGACCTGCCCCAAGCTCCTCTCCACCGTCCGCTCCGGCGTCCTATCCGCCATCGCTAAGGAAACCCGCATCGGCGCTTCCTTACTCCGCCTCCATTTTCACGACTGCTTTGTTAACGGATGTGATGGGTCAATTCTTTTAGCCGACACTCCAACTTTTAGAGGAGAGCAAACCGCACCTGCAAACAATAGGTCCGTTAGAGGCTTTAACGTTGTAGAAGCTATCAAGAGTAGCGTGGAAAAAATTTGCCCTGGCGTGGTCTCTTGTGCTGATATTTTGACTCTTACTTCTCGTGACTCTGTCGTCATCTTGGGAGGGCCAAATTGGGAGGTGAAACTAGGAAGAAGAGATTCAAAAACAGCTAGCTTCTCTGCCGCCAGCAGTGGTGTCATCCCTCCACCGACTTCGACCCTCGACAACCTCATCAATCGATTCAGTGCCAAAGGCCTCTCCACTAAAGACATGGTTGCCTTGTCCGGGGCCCACACGATAGGTCTAGCAAGGTGCGCAACCTTTCGAAACCGTATATACAACGAGACGAACATAGACGCCTCATTCGCCAAGCTAAGACAAAGCAACTGCCCAAGAAGTGGAGGAGATGACAATCTTGCACCTCTAGACGTCGCAACACCTAAGCTTTTCGACAACTATTATTACAAGAACCTTTTGAACCAGAAGGGTCTGCTCCACTCCGACCAGATTCTCCACAACGGAGGATCCACCGATTCGTTGGTCGAATTGTACAGTAAAAATGATCAGACTTTCGACAGTGATTTTGTCGCCGCAATGATTAGAATGGGAGACATTCAACCGCTTACGGGATCTCAGGGCGAGATCAGAAAGGTCTGCAGCAGACCCAACTGA 978 48.98 MAITTSHTPKTKVLLVLALHLFLFISSSSAQLSTAFYSKTCPKLLSTVRSGVLSAIAKETRIGASLLRLHFHDCFVNGCDGSILLADTPTFRGEQTAPANNRSVRGFNVVEAIKSSVEKICPGVVSCADILTLTSRDSVVILGGPNWEVKLGRRDSKTASFSAASSGVIPPPTSTLDNLINRFSAKGLSTKDMVALSGAHTIGLARCATFRNRIYNETNIDASFAKLRQSNCPRSGGDDNLAPLDVATPKLFDNYYYKNLLNQKGLLHSDQILHNGGSTDSLVELYSKNDQTFDSDFVAAMIRMGDIQPLTGSQGEIRKVCSRPN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6189940 6191502 - Hsped.08g06870.1 Hepe08g0687 576659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0687 325 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Hepe08g0687 325 FunFam Peroxidase 170 304 - -
Hepe08g0687 325 SUPERFAMILY Heme-dependent peroxidases 31 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 Gene3D - 36 322 - -
Hepe08g0687 325 FunFam Peroxidase 35 178 - -
Hepe08g0687 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Hepe08g0687 325 Gene3D Peroxidase, domain 2 170 304 - -
Hepe08g0687 325 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 Pfam Peroxidase 48 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 ProSiteProfiles Plant heme peroxidase family profile. 31 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0687 325 CDD secretory_peroxidase 31 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0687 325 PANTHER PEROXIDASE 72-RELATED 20 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0082 Hepe-Chr8:648102 Hepe08g0687 Hepe-Chr8:6189940 9.56e-98 dispersed
Hepe08g0687 Hepe-Chr8:6189940 Hepe08g0689 Hepe-Chr8:6213770 1.25e-173 dispersed
Hepe08g0687 Hepe-Chr8:6189940 Hepe08g0688 Hepe-Chr8:6198786 3.73e-172 tandem
Hepe02g3288 Hepe-Chr2:82486076 Hepe08g0687 Hepe-Chr8:6189940 3.52e-134 transposed
Hepe10g1377 Hepe-Chr10:50136096 Hepe08g0687 Hepe-Chr8:6189940 3.21e-146 wgd
Hepe04g1303 Hepe-Chr4:68627512 Hepe08g0687 Hepe-Chr8:6189940 3.06e-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0687 K00430 - csv:101207371 533.102