Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0688 ATGGCTTCTCCTAACAAAATGGTTGTGGCTATAGCATTAGTCTTAATGGCAATAATGTTCATGGGGAGCTCCTCAGCTGAGCTCTCTCCCAATTTCTACTACAAGAGTTGCCCCAAGCTCCTCAACACCGTCAGAGCCGGTATTCGGTCTGCCGTGGCTAAAGAAGCTCGCATGGGCGCTTCCCTTCTCCGCCTCCACTTTCACGACTGCTTTGTTAACGGTTGTGATGGCTCGATTCTTCTTGAAGATACTCCTACGTTTATAGGAGAGCAAACAGCAGCTCCCAACAACAGATCTGTTAGAGGATTCAACGTGATCGAGAGTATAAAGAAAAATGTCGAAAAAATTTGTCCTAATGTTGTCTCTTGTGCTGATATTTTGACTCTTTCTGCTCGTGATTCCGTTGTGGCGCTTGGAGGACCAAGTTGGAAGGTGAAATTGGGAAGAAGAGATTCAAAAACAGCCAGCTTCGCCGCTGTCACCGGAGCCATTCCTCCGCCAACCTCCACTCTCAACACCCTCATCGACCGATTCAACACCAAAGGTCTCTCCCCTCGAGACTTGGTTGCCTTATCTGGGGCCCACACGATCGGGCAAGCAAGGTGTTTGTTTTTCAAGAACCGTATATACAACGAGACCAACATCGACAAATCCTTCGCCAAAGAGAAGCAAAGGAACTGCCCTAGGAATGGAGGAGACGACAATCGTGCCCCTCTCGACTTCAAAACCCCAAAGCTTTTCGACAACTACTACTACAAGAACCTTTTGGAGAAGAAGGCTTTGCTCCGCTCGGATCAGGTGCTACACGACGGCGGATCCACGGATTCGTTGGTTGAACTCTACGGTGGCGATAGTGAGGCCTTCGAGTCAGACTTTGTGGCGGCTATGATCAAGATGGGCGACATTGAGCCGCTCACTGGTTCACAAGGCCAGATCCGAAAGGTTTGCAGCCGACCCAATTGA 963 49.43 MASPNKMVVAIALVLMAIMFMGSSSAELSPNFYYKSCPKLLNTVRAGIRSAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFIGEQTAAPNNRSVRGFNVIESIKKNVEKICPNVVSCADILTLSARDSVVALGGPSWKVKLGRRDSKTASFAAVTGAIPPPTSTLNTLIDRFNTKGLSPRDLVALSGAHTIGQARCLFFKNRIYNETNIDKSFAKEKQRNCPRNGGDDNRAPLDFKTPKLFDNYYYKNLLEKKALLRSDQVLHDGGSTDSLVELYGGDSEAFESDFVAAMIKMGDIEPLTGSQGQIRKVCSRPN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6198786 6200413 - Hsped.08g06880.1 Hepe08g0688 576660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0688 320 Gene3D - 31 317 - -
Hepe08g0688 320 ProSiteProfiles Plant heme peroxidase family profile. 27 320 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 FunFam Peroxidase 31 173 - -
Hepe08g0688 320 CDD secretory_peroxidase 27 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0688 320 Pfam Peroxidase 44 282 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Hepe08g0688 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 FunFam Peroxidase 165 299 - -
Hepe08g0688 320 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Hepe08g0688 320 PANTHER PEROXIDASE 72-RELATED 13 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 SUPERFAMILY Heme-dependent peroxidases 27 320 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0688 320 Gene3D Peroxidase, domain 2 165 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0701 Hepe-Chr7:8393147 Hepe08g0688 Hepe-Chr8:6198786 3.97e-100 dispersed
Hepe08g0688 Hepe-Chr8:6198786 Hepe10g1377 Hepe-Chr10:50136096 1.11e-140 dispersed
Hepe09g1787 Hepe-Chr9:56162130 Hepe08g0688 Hepe-Chr8:6198786 1.46e-53 dispersed
Hepe08g0687 Hepe-Chr8:6189940 Hepe08g0688 Hepe-Chr8:6198786 3.73e-172 tandem
Hepe08g0688 Hepe-Chr8:6198786 Hepe08g0689 Hepe-Chr8:6213770 4.76e-209 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0688 K00430 - csv:101204245 565.074