Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0689 ATGGCGATTACGATTTCTTCTCCAAACAAAATGGCTATGGTTTTAACATTAGCCTTATTGGCAGTGTTCATGGGGAGCTCCTCAGCTCAGCTTTCTACCAACTTCTACTACAATAGTTGTCCCAAACTCCTCGGCACCGTTCGAGCCGGAATTCAATCCGCCGTGGCTAAGGAAGCTCGCATGGGCGCTTCCCTTCTCCGCCTTCACTTTCACGACTGCTTTGTTAACGGTTGCGATGGGTCAATTCTTCTAGAAGATACTCCTACGTTTGTAGGAGAGCAAACAGCAGCTCCCAATAATAGATCCGTTAGAGGGTTTAACGTGATTGAGAGTATTAAGAAAAATGTGGAAAAAGTTTGTCCGGGTGTTGTCTCTTGTGCTGATATTGTGACTATTTCTGCTCGCGACTCCGTTGTAGCTCTTGGAGGGCCAAGTTGGGAGGTGAAATTGGGAAGAAGGGATTCTCAAACAGCTAGCTTCTCTGATGTCACCGGCGCCATTCCTCCGCCAACCTCCACCCTCGACACCCTCATCGACCGGTTCAACACTAAAGGCCTTTCACCTCGAGACTTGGTTGCCTTATCTGGTGCACACACGATCGGTCAAGCAAGGTGTTTATTTTTTAAGGACCGTATATACAACGAGACCAACATCGACGAGTCATTCGCCGAGAAGAGGCAAAGGAATTGCCCAAGAAATGGAGGAGATGACAATCGTGCCCCTCTAGACTTCCAAACTCCAAATCTTTTCGACAATTACTACTACAAGAACCTTGTAGATGAAAAGGCTTTGCTCCGCTCGGATCAGGTGCTACACGACGGCGGATCCACGGATTCGTTGGTCGAACTCTACGGTGATGATAGTGAGGCCTTCGAGTCAGACTTCGTGGCGGCTATGATCAAGATGGGCGACATTGAGCCGCTCACTGGTTCACAGGGCGAGATCCGAAAGGTCTGCAGCCGACCCAACTGA 972 49.07 MAITISSPNKMAMVLTLALLAVFMGSSSAQLSTNFYYNSCPKLLGTVRAGIQSAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFVGEQTAAPNNRSVRGFNVIESIKKNVEKVCPGVVSCADIVTISARDSVVALGGPSWEVKLGRRDSQTASFSDVTGAIPPPTSTLDTLIDRFNTKGLSPRDLVALSGAHTIGQARCLFFKDRIYNETNIDESFAEKRQRNCPRNGGDDNRAPLDFQTPNLFDNYYYKNLVDEKALLRSDQVLHDGGSTDSLVELYGDDSEAFESDFVAAMIKMGDIEPLTGSQGEIRKVCSRPN 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6213770 6215175 - Hsped.08g06890.1 Hepe08g0689 576661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0689 323 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 CDD secretory_peroxidase 30 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0689 323 Gene3D Peroxidase, domain 2 168 302 - -
Hepe08g0689 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Hepe08g0689 323 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Hepe08g0689 323 ProSiteProfiles Plant heme peroxidase family profile. 30 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 Gene3D - 34 320 - -
Hepe08g0689 323 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 FunFam Peroxidase 34 176 - -
Hepe08g0689 323 Pfam Peroxidase 47 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 PANTHER PEROXIDASE 72-RELATED 17 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 SUPERFAMILY Heme-dependent peroxidases 30 323 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0689 323 FunFam Peroxidase 168 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3288 Hepe-Chr2:82486076 Hepe08g0689 Hepe-Chr8:6213770 5.08e-131 dispersed
Hepe08g0687 Hepe-Chr8:6189940 Hepe08g0689 Hepe-Chr8:6213770 1.25e-173 dispersed
Hepe08g0689 Hepe-Chr8:6213770 Hepe10g1377 Hepe-Chr10:50136096 1.53e-141 dispersed
HepeContig65g0027 Hepe-ChrContig65:3130350 Hepe08g0689 Hepe-Chr8:6213770 1.60e-61 dispersed
Hepe08g0689 Hepe-Chr8:6213770 Hepe08g0691 Hepe-Chr8:6233095 2.91e-106 proximal
Hepe08g0688 Hepe-Chr8:6198786 Hepe08g0689 Hepe-Chr8:6213770 4.76e-209 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0689 K00430 - csv:101204245 567.385