Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0694 ATGGTTATGGAGTTCTTCTTCTCTGGAACTGTTGAAGATCCTAATGGCCGGCGGAGACTGCCGGAGCATACAGCGCCGCCGTTGTCTCCGCCTCTTTTTTCTCCTTCTAATTCCTTCTTCACCATCCCTCCTGGGATCAGCCCCTCCCAATTTCTTGACTCCCCTGTTCTTCTTAACTCTTCTAATATTATTCTGTCATCGCCGACTACCGGAGAAATTTCCGGCGGATATTTGATCAGAAACAGTAACAATTCCGGCCACCACCAACAGAACATCAAACAAGAATACAACAACGTACCTGAATTCTCATTTCCTCGTACCCATCCCACAAAATCATCATCAATGTTTCAATCGTCTTCAACACTGCAAAATCAGCCATGGGGTTCACAAGCCGCCGTGAATTTCTCACCGGAGACCACCATAGACGGCGGTTCAAAATCCGACAGGCACCCACAATCTCAATCAAAAAACAGAGCATCTGAGGACGGGTTTAATTGGAGAAAATATGGGCAAAAACTGGTAAAAGGAAGTGAAAATCCAAGAAGCTATTACAAATGTACACACCCAAATTGCCCTGTGAGAAAACAAGTTGAAAAATCATTGATTGGTCAAATTACAGAAATTGTTTACAAAAGTAAACATAATCATCCAAAACCAGAGTTCACAAGAAGATCATCATCTTCTTCATCATCTTCTTCCTCATCTCAATGGTTATCAGAAGCTTTTCCTCAAACAATGGCTGCAGAGAGCTCTTCAATTACGATTGGGGATGATGATTCTGACGAAGCTGATGCAAAAAGATGGAAAAGTGAGAGTGAGAATGAAATTATATGTGGAGGAGCAGGAGGAGGGAAAACGGTGAGAGAACAGAGAATTGTTGTTCAAACAATTAGTAATGTGGATAAATTAGACGATGGATATTGGTGGAGAAAATATGGACAGAAAGTAGTCAAGGGAAATCCAAATCCAAGGAGCTACTACAAGTGCACGTACGCAGGATGTGGAGTGAGAAAGCATATAGAGAGAGCGTCCCACGATTTAAGGGCAGTCATCACTACCTACGAAGGCAAGCACAACCACGAAATTCCGGCAGCCCGCGGCAGCGGCAGACCAGTACCCAATAATAATCACGGTAACGACAACGACAGTGCATCGAACAACAGCGGTGACCGACGACGATCGAGTTCCGAGATCTGTGGTGGCAATAATGGATTCTCGGAGATGGGAAATTCGATGTCGTGGAGGAGCAAAGAAGACGTCGCCGATGACATTTTTCGGTCCTTAATAGGATGA 1293 44.24 MVMEFFFSGTVEDPNGRRRLPEHTAPPLSPPLFSPSNSFFTIPPGISPSQFLDSPVLLNSSNIILSSPTTGEISGGYLIRNSNNSGHHQQNIKQEYNNVPEFSFPRTHPTKSSSMFQSSSTLQNQPWGSQAAVNFSPETTIDGGSKSDRHPQSQSKNRASEDGFNWRKYGQKLVKGSENPRSYYKCTHPNCPVRKQVEKSLIGQITEIVYKSKHNHPKPEFTRRSSSSSSSSSSSQWLSEAFPQTMAAESSSITIGDDDSDEADAKRWKSESENEIICGGAGGGKTVREQRIVVQTISNVDKLDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLRAVITTYEGKHNHEIPAARGSGRPVPNNNHGNDNDSASNNSGDRRRSSSEICGGNNGFSEMGNSMSWRSKEDVADDIFRSLIG 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6248899 6252587 + Hsped.08g06940.1 Hepe08g0694 576666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0694 430 MobiDBLite consensus disorder prediction 222 254 - -
Hepe08g0694 430 Gene3D WRKY domain 145 220 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 FunFam WRKY transcription factor 57 289 363 - -
Hepe08g0694 430 ProSiteProfiles WRKY domain profile. 155 219 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 MobiDBLite consensus disorder prediction 100 164 - -
Hepe08g0694 430 MobiDBLite consensus disorder prediction 100 142 - -
Hepe08g0694 430 SUPERFAMILY WRKY DNA-binding domain 295 363 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 Gene3D WRKY domain 290 356 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 ProSiteProfiles WRKY domain profile. 298 363 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 113 378 IPR044810 GO:0003700(InterPro)
Hepe08g0694 430 FunFam WRKY transcription factor 150 220 - -
Hepe08g0694 430 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 Pfam WRKY DNA -binding domain 304 361 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 MobiDBLite consensus disorder prediction 358 404 - -
Hepe08g0694 430 MobiDBLite consensus disorder prediction 212 271 - -
Hepe08g0694 430 MobiDBLite consensus disorder prediction 372 404 - -
Hepe08g0694 430 SUPERFAMILY WRKY DNA-binding domain 156 219 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 SMART WRKY_cls 160 218 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 SMART WRKY_cls 303 362 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe08g0694 430 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0048 Hepe-Chr5:521195 Hepe08g0694 Hepe-Chr8:6248899 1.30e-85 dispersed
Hepe08g0694 Hepe-Chr8:6248899 Hepe10g1775 Hepe-Chr10:54519892 3.62e-70 dispersed
Hepe10g1368 Hepe-Chr10:49997133 Hepe08g0694 Hepe-Chr8:6248899 2.39e-57 wgd
Hepe02g3191 Hepe-Chr2:81462853 Hepe08g0694 Hepe-Chr8:6248899 2.71e-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56146 PF03106 WRKY 3.20E-23 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0694 K13424 - csv:101205221 413.69