Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0716 ATGGCCGTCACCGTCGCCGCCGCCTGCTCCACCGACTTCACTCGCGACTCCGCCTGTCGAGACAGCCGCGCCGCCGCCCATCTGAAGCTGATTTCCATCTTCCTCATCTTCCTCACCAGCGTAATCGGCGTCTCCTTGCCCGTCCTCCTCACCCGCTTCTTCCACGGCAAACCGCTTTACGACAAAGCGATTCTCGTCATAAAGTGCTTCGCCGCCGGCGTCATTCTCTCCACCTCACTAGTCCACGTCCTCCCCGACGCCTACGCCGCCCTCTCCGACTGCCAAGTCGCCTCCCAGCACCCCTGGCGCGACTTCCCCTTTTCCGGCCTCGTCACCATGATCGGCGCACTGCTGGCACTCCTCGTCGACGTCGCCGCCACGTCGCACGTCGAGCACGGCCAGTACAATCCGGTGGAGACCCAACCGGCGGGCACTGATTCAGGCGGTGATATTGGGCTTCTGGTGTCGGTGGGTTGTTGTTCAAAATCGGATCAGACAATAATGGCGGATTCCGGCGAGCGGCGACGGGAGGAGGAATTGGTGAAGATGAAGCAGAAACTTGTGTCTCAGGTATTGGAAATTGGGATTATATTTCACTCAGTGATTATTGGAGTTACGATGGGAATGTCTCAAAATCAGTGCACTATTAAACCTCTTGTTGCTGCTCTTGCATTTCACCAAATCTTTGAAGGAATGGGCCTTGGCGGATGTATTGCTCAGGCGGGATTCAGCTTCACGACGACATTGTATATGTGTTTCATGTTCTCGGTGACGACGCCGATGGGAATAGTGTTAGGAATGGTAGTATTTTCAATGACAGGTTACGACGATAGCAGTCCGAAAGCATTGATTATGGAAGGTTTATTGGGTTCATTTTCATCAGGGATTCTGATATACATGGCTCTTGTTGATCTAATAGCAGTTGATTTTTTTCACAACAAGATGATGAGCTCAAATCAAAGGCTAAAAAAGGTTTCTTTTATTGCCTTGTTGCTTGGGTCTGCTTCCATGTCTGTTTTGGCTCTGTGGGCTTGA 1035 52.17 MAVTVAAACSTDFTRDSACRDSRAAAHLKLISIFLIFLTSVIGVSLPVLLTRFFHGKPLYDKAILVIKCFAAGVILSTSLVHVLPDAYAALSDCQVASQHPWRDFPFSGLVTMIGALLALLVDVAATSHVEHGQYNPVETQPAGTDSGGDIGLLVSVGCCSKSDQTIMADSGERRREEELVKMKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIKPLVAALAFHQIFEGMGLGGCIAQAGFSFTTTLYMCFMFSVTTPMGIVLGMVVFSMTGYDDSSPKALIMEGLLGSFSSGILIYMALVDLIAVDFFHNKMMSSNQRLKKVSFIALLLGSASMSVLALWA 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6435943 6438136 + Hsped.08g07160.1 Hepe08g0716 576688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0716 344 PANTHER ZINC/IRON TRANSPORTER 25 343 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Hepe08g0716 344 Pfam ZIP Zinc transporter 27 341 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Hepe08g0716 344 NCBIfam ZIP zinc/iron transport family 15 344 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0716 Hepe-Chr8:6435943 Hepe08g1395 Hepe-Chr8:16448721 3.54e-66 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0716 K14709 - csv:101214729 528.865