Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0741 ATGGCGCCATCCACCGCCGCCGGATCTCTCTGCAACAAATTCCTCTCTCTTTTACTCCTAATTCTCCACGTCGGCTGCTTCCTCTTAACCACCGCCGACCACCGCCGCCGTCACCCTTCCAAGAAACGCAACGAATCATCTCCCACGCCGTCCTGTCTTAAGCCACACAAAGCCCTAATTTCCTCTCTTTCATTTCTCAAACGAATCTTCTCTTCAAAAACTTGCAAAATGGCAATCCAAACAACTAGTCCGTCGACTCCGGCTCGATCCTCGCAGCACTCGATCGTCACGCTAATCCAACCCGAGATTCCGCCGCCGGTGGATGCTACCACTCCGACTCCGACTCCGACTCCAACTCCAACGCAAGATTCCGACATCACGACGGCGGAGATCAACCAATTCTTCCCGCTCCGCAACGATATCTTCCCCTGCACTGCCTGCGGCGAGATTTTTCCGAAGGCTCAATCGCTCGAACAGCACCAATCGGCGAAGCACGCCGTGTCGGAGCTTGCCGATTCGGATTCCGGCAAGAACATCGTCCGGATCATTTTCGAAACCGGATGGACCAGCAGAGAAAAAAGCCCTAAAATCCATCGAATCTTGAAAATCCACAACAGCCAGAAGATTCTCTCCAGATTCGAAGAGTACAGAGAGTCGGTGAAGGCCAAAGCCGCCAGAAACGGCGGCGTGAAGCGGCGGGACGAGCGGTGCATAGCCGACGGCAACGAGCTTCTGAGGTTTCACTGCTCGACGTTCTTGTGCGATTTGGGGCAAAACGGTAATTCCAGCATTTGCGGGCAGCAATTTTGCAGTATTTGTGGGATTATCAAATCGGGATTCTCACACAAGTTGGACGGAATTTCTACGCTATCGAATACGTGGAGGGCACACGTGGCGATCCCTGACGACATCGAAGAGGAGTTCAAGTTCATGAACGTGAAACGGGCGATTTTGGTTTGTCGGGTCGTGGCAGGTCGGGTCGGGTCAGACGGCGATGAGCCGGAGAAGGACGGCGGCGGGGCTGACTCCGTCGTCGGCAGGAGTGGGAGTGGGGCCCAGACGACGGTGGATGAAGAAGAGCTGTTGGTTTTCAATCCGAGGGCTGTGCTCCCCTGCTTCGCGATTGTGTACGAAATCTGA 1140 54.65 MAPSTAAGSLCNKFLSLLLLILHVGCFLLTTADHRRRHPSKKRNESSPTPSCLKPHKALISSLSFLKRIFSSKTCKMAIQTTSPSTPARSSQHSIVTLIQPEIPPPVDATTPTPTPTPTPTQDSDITTAEINQFFPLRNDIFPCTACGEIFPKAQSLEQHQSAKHAVSELADSDSGKNIVRIIFETGWTSREKSPKIHRILKIHNSQKILSRFEEYRESVKAKAARNGGVKRRDERCIADGNELLRFHCSTFLCDLGQNGNSSICGQQFCSICGIIKSGFSHKLDGISTLSNTWRAHVAIPDDIEEEFKFMNVKRAILVCRVVAGRVGSDGDEPEKDGGGADSVVGRSGSGAQTTVDEEELLVFNPRAVLPCFAIVYEI 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6672856 6674544 - Hsped.08g07410.1 Hepe08g0741 576713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0741 379 Gene3D - 166 378 - -
Hepe08g0741 379 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 64 377 - -
Hepe08g0741 379 SUPERFAMILY ADP-ribosylation 168 378 - -
Hepe08g0741 379 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 170 IPR013087 -
Hepe08g0741 379 MobiDBLite consensus disorder prediction 329 351 - -
Hepe08g0741 379 MobiDBLite consensus disorder prediction 105 119 - -
Hepe08g0741 379 MobiDBLite consensus disorder prediction 102 125 - -
Hepe08g0741 379 ProSitePatterns Zinc finger C2H2 type domain signature. 144 165 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2313 Hepe-Chr2:67059264 Hepe08g0741 Hepe-Chr8:6672856 2.58e-59 dispersed
Hepe06g1658 Hepe-Chr6:67493750 Hepe08g0741 Hepe-Chr8:6672856 1.12e-31 dispersed
Hepe07g1343 Hepe-Chr7:44107672 Hepe08g0741 Hepe-Chr8:6672856 2.55e-44 dispersed
Hepe08g0741 Hepe-Chr8:6672856 Hepe07g1110 Hepe-Chr7:19100442 5.11e-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56152 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0741 - - - 0.0