Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0779 ATGGATCCTCCTAATCTTAAGGGTTTCCCAGATCATTATAACTTCGATTACCAAACCCCTTTTACCCAATTGCATGATCTTCCCCCCAATACTTCGATTCATGATTGGGGTTCTTTACCCAATTCATATCTCTACCCTGTACTCGAAAACAGCTTTGAATTCAACCACCCATCTCCAGATCTTGTTCCCTTCGTCGTCGGGAATTATGAACCAAACCCTAATAGTTTTTGTGAGAGGCCGCCGCCGGAAGGAGGAGACTCAATTTCAGGGGTGACTTCAGCTTCAGGGTTAAGCCCTGGTGGCGACTCTTCCTCGGATGAGACTGATTTCAAGGAAACTGTTCTCAAGTACATAAGCCAAATGCTTATGGAAGAGAATTTGGAGGAGAAGCCCTGCATGTTTTATGATCCTTTAGGGCTTAAAGTTACTGAGAAATCTTTCTATGATGCTCTTGGTACGAATTACCCTCCTTCACCTAACCAACCTCCCCTGGATTGTGAGAGCTCTGAAGATTTTAGTAGCAATTCTCCTGACCCCCAATGGGTTGTTGATCCTGGAGAAAATAAGCCCTCTATACTTCCAAGATCTTTGTATAAGTCGAATTTCGAGCTTAGTTCTGGCAATCAAAGCAGCCTGAGTATTAATAGTCATGAGCTGGTCACTGAGCTGTTGACTCAGAATATCTTTAGTGATAGCACATCCATCTTGCAATATCAAAAAGGGTTGGAGGAGGCAAGTAAGTTTCTTCCCGGAGGTGATCCGCTGAATATTGATCTTGGGAGAGTAGCTTCTAAGGTAATGGATGCAACAGAGAAGGTTAAAAGGGAGGGTTCACCAAACGGATCGAAGGGCAGGAAGAATCATGAACGTGAAGATGTAGACTTGGATTCGGAAGAAGGGAGGAGAAACAAGCATGCAGCCACTTATGTGGACGAGGAAGAATTATCTGAGATGTTCGATAAGGTTTTACTTTATGATTGTGGAAATGAGACCTCTGCAAATGGTGGGGGTGAGAAATTGCAGTATAACGGGCAACTTCATGGATCGATTGCTGGGAAAGCAGCTCGAGAAAAGAAACAGGAGAAGAGAAGAGACTCTGTGGATTTGAGAAAACTTTTGATATTATGTGCACAAGCTGTGTCTTCTGATGACCGTAGGATTTCTTATGAACTACTTAAGCAGATTAGGCAGCATTCTACAACCATTGGGGATGGTTCCCAAAGAATGGCTCATTTCTTTGCTAACGCTCTCGAGGCTCGCATGGTTGGCACTGGCACAGGAAGCAGAATCTACTATGAATCTCTATCTCAAAGCAAGATTTCAGCTGCTGATATGTTGAAAGCTTACCAAGCTCACATTTCATCTTGCCCGTTTAAGAAACTCTCGCTCTTTTTCATGATTAAAATGATTTTGAAGGTTGCAGAGAAGGCTGAAAGTCTTCATATTATTGATTTTGGCATTTGCTATGGTTTCCTGTGGCCGATGTTAATTCAGTTTCTTGCACAAGTACCTGGTGGTCCACCCAAGCTACGCATTACCGGTATAGATCATCCTCTACCAGGATTTCGTCCTGCAGAAAAGATCGATGAGTCGGGTCGTCGTTTGGCAAAATACTGTGAGCGTTTCAAAGTTCCTTTTGAATATCAAGCCATAGCATCACATAACTGGGAAACTATCCGAGTCGAGGACTTCAAGCTTAATAGCAGTGACGTGCTTGTTGTGAACTGTTTCTACAGGTTTAGCAACCTAGTTGATGAAACTGTCGAAGAAAGTAGTCCAAGGGATGTTGTTCTGCGTTTAGTAAGGAAGATCAATCCAAAAATCTTTGTCCATTCTGTGGTTAATGGATCCTACAATGCGCCATTCTTCATAACACGATTCCGGGAGGCACTCTTCCACTTCTCTGCACTATATGATGCTCTAGACGTTAATTTACCTCGTGAAAGTGAAGACAGGATGATGCACGAGAGGGAGTTTCTCGGGCGCCAAATTATGAACGTAGTAGCATGTGAGGGTGTTCAGAGGGTTGAGAGGCCTGAAACCTACAAGCAGTGGCAGGTTCGGTGTACGAGGGCTGGTTTCAGGCAGCTTCCTTTGGACAAAGAGATTATTAACAAGTTTAGGACCAAGTTAACAACCCATTACCACAAAGATTTTGTACTCGATGAAGATGACGGTTGGATGCTTCAAGGATGGAAAGGCCGGATTGTCTTTGGTTCTTGTTGTTGGGTGCCAGCATAG 2241 43.64 MDPPNLKGFPDHYNFDYQTPFTQLHDLPPNTSIHDWGSLPNSYLYPVLENSFEFNHPSPDLVPFVVGNYEPNPNSFCERPPPEGGDSISGVTSASGLSPGGDSSSDETDFKETVLKYISQMLMEENLEEKPCMFYDPLGLKVTEKSFYDALGTNYPPSPNQPPLDCESSEDFSSNSPDPQWVVDPGENKPSILPRSLYKSNFELSSGNQSSLSINSHELVTELLTQNIFSDSTSILQYQKGLEEASKFLPGGDPLNIDLGRVASKVMDATEKVKREGSPNGSKGRKNHEREDVDLDSEEGRRNKHAATYVDEEELSEMFDKVLLYDCGNETSANGGGEKLQYNGQLHGSIAGKAAREKKQEKRRDSVDLRKLLILCAQAVSSDDRRISYELLKQIRQHSTTIGDGSQRMAHFFANALEARMVGTGTGSRIYYESLSQSKISAADMLKAYQAHISSCPFKKLSLFFMIKMILKVAEKAESLHIIDFGICYGFLWPMLIQFLAQVPGGPPKLRITGIDHPLPGFRPAEKIDESGRRLAKYCERFKVPFEYQAIASHNWETIRVEDFKLNSSDVLVVNCFYRFSNLVDETVEESSPRDVVLRLVRKINPKIFVHSVVNGSYNAPFFITRFREALFHFSALYDALDVNLPRESEDRMMHEREFLGRQIMNVVACEGVQRVERPETYKQWQVRCTRAGFRQLPLDKEIINKFRTKLTTHYHKDFVLDEDDGWMLQGWKGRIVFGSCCWVPA 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6977131 6980183 - Hsped.08g07790.1 Hepe08g0779 576751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0779 746 MobiDBLite consensus disorder prediction 152 188 - -
Hepe08g0779 746 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 354 743 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Hepe08g0779 746 ProSiteProfiles GRAS family profile. 360 744 IPR005202 -
Hepe08g0779 746 MobiDBLite consensus disorder prediction 268 304 - -
Hepe08g0779 746 MobiDBLite consensus disorder prediction 73 108 - -
Hepe08g0779 746 MobiDBLite consensus disorder prediction 88 104 - -
Hepe08g0779 746 MobiDBLite consensus disorder prediction 164 181 - -
Hepe08g0779 746 Pfam GRAS domain family 369 743 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0779 Hepe-Chr8:6977131 Hepe10g1981 Hepe-Chr10:56869049 1.33e-58 dispersed
Hepe10g1249 Hepe-Chr10:47888628 Hepe08g0779 Hepe-Chr8:6977131 2.55e-186 wgd
Hepe05g0168 Hepe-Chr5:2073651 Hepe08g0779 Hepe-Chr8:6977131 2.11e-190 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56155 PF03514 GRAS 2.60E-102 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0779 K27753 - csv:101203568 1085.09