Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0790 ATGGGTAACGGGATTGGGAAGCTCGGCGTTTGCTTCACCGGAATCGAAGACGGTCGGCGGCGTCCAGATATCTCCGTTCTGCTATCGAATCCACTCGACGAAGGGCTCGGCCACTCGTTCTGCTACGTCCGGCCGGATCCCACGAGGCTTTCGTCATCAAAAGTTCATTCGGAAGAAACCACCACTTTCCGATCAATCTCCGGCGCCTCCGTGAGCGCCAATACCTCGACGCCACTTTCCACCGCTCTGATTGATCTGTATTCGTACAATAGCATTGATCGCGCGGCGGCGTTTGAGAGCTCGAATTCTTTCGCTTCAATCCCTTTGCAACCAATCCCTAGAAATCTGATCAATTCGGGTCCGATTTCGGGTAATTTCAGCGGATTCCCCTGTTCGGGTCCTTTGGAAAGAGGGTTTTTATCGGGTCCGATTGAGCGAGGGTTTATGTCGGGTCCTTTGGATCGGGCCATTTTTTCGGGTCCTCTTGATAATTCTGCTTCGACTAATGAGTTCCAGAGAAGTTTCTCTCATGGCGGAGGGTTTAATTCCAGATCTAGATCGAGAAAAAGTCGGTTAATTCGGATTTTGAAAACCGCGATTTCGAAGTCGATTTTTCGTGGGCAGAATTCCATTGTTGCTCCGATTAAAGCTGTTAAAGAACCCGATTGGATCGTCTTGTCGGAGAAGCAGCATAATGAGAATTTGACTGTGAGTAGTTTGAATTTCAGTAGCGATGGGAGTTTGGAGGATGATGATTCAATGGAGAGCCAAAATCTGCAGTGGGCTCAGGGAAAAGCAGGGGAAGATCGAGTTCATGTTGTTGTTTCTGAAGAACATGAATGGGTTTTCGTTGGGATTTATGATGGATTTAACGGTCCTGATGCTCCTGATTATCTTTTGTCGAATTTATACTCGTTTGTTCATAAAGAGCTCAAGGGTTTGTTGTGGGATGAGAAGCTCGATTCGGCCGGAGTCGCCGCTCCGGTTGCTTCCCCTGTTCGATATGAGAATTCGTGTTTGGAAACGAGAGTTTCGGAGAGGAATCGGGCGAGTGATGCTTGTTCTCAGTGTGTAGAACCAGAGAATTATCCTTGTGCTAGTGGAGTTGGGAATTCTGGATCAAATTCGAGGAGACGAAAAGGGAAGAATTCGAGTGGGAAGTTTAGAGGAGCTGCTGAAAAGTGGGAGGATAATCAGCGGCGGTGGAAGTGCGAATGGGACCGAGAAAGGTTAGAACTCGATCGGAGGTTGAAGGAGCAGTTGAATCGATCGGGGTCGAACGGTTCGAGGTCGATTAATCATTCGGATGTTCTCAAAGCTCTGTCCCAGGCATTGAAGAAAACAGAGGAGGCTTATTTAGATATTGCAGACAAGATGCTTGATGAAAATCCTGAACTGGCTTTGATGGGTTCTTGTGTTCTTGTGATGCTTATGAAAGGAGATGATGTTTATGTGATGAATGTTGGCGATAGCCGAGCTGTTTTAGCGCAGAAGGCAGAGCCCGATTATTGGCTCGGGAAGATTCGACAGGACTTGGAGAGGATTAATGAAGAGCCAGTTCATGACATTGAAGCATTCGATGGCGATAGAGCATTCACCTCTGCTAATCTTACTGCTTTTCAGCTTTCCATAGATCACAGTACCAGTGTTGATGAGGAAGTTCAGAGAATAAAAAATGAACACCCTGATGATGCTGGTGCTGTGATGAACGACCGTGTGAAAGGCTCGTTGAAGGTTACTCGAGCGTTCGGTGCTGGTTTCCTCAAACAGCCTAAATGGAACAACGCGCTACTGGAGATGTTCAGAATCGACTACGTCGGGAGATCATCATACATCAATTGTCTACCATCTCTCTACCACCACAGATTAGGACCAAAAGACAGGTTTTTGATACTGTCATCTGATGGACTCTACCAGTACTTCACAAACGAAGAAGCTGTTTCTGAAGTTGAACTTTTCATCACATTGCAACCCGAAGGAGATCCCGCTCAACATCTGGTTGAACTACTGCTGTTTCGGGCTGCAAAGAGAGCTGGTTTGGATTTCCACGAGTTACTCGAAATACCGCAGGGCGACCGGAGGAAGTACCACGACGATGTATCGATCATTGTAATTTCATTAGAAGGGAGGATCTGGAGATCCTGTGTATAA 2151 46.95 MGNGIGKLGVCFTGIEDGRRRPDISVLLSNPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRSISGASVSANTSTPLSTALIDLYSYNSIDRAAAFESSNSFASIPLQPIPRNLINSGPISGNFSGFPCSGPLERGFLSGPIERGFMSGPLDRAIFSGPLDNSASTNEFQRSFSHGGGFNSRSRSRKSRLIRILKTAISKSIFRGQNSIVAPIKAVKEPDWIVLSEKQHNENLTVSSLNFSSDGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHEWVFVGIYDGFNGPDAPDYLLSNLYSFVHKELKGLLWDEKLDSAGVAAPVASPVRYENSCLETRVSERNRASDACSQCVEPENYPCASGVGNSGSNSRRRKGKNSSGKFRGAAEKWEDNQRRWKCEWDRERLELDRRLKEQLNRSGSNGSRSINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEEPVHDIEAFDGDRAFTSANLTAFQLSIDHSTSVDEEVQRIKNEHPDDAGAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGRSSYINCLPSLYHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVELLLFRAAKRAGLDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7084474 7087953 + Hsped.08g07900.1 Hepe08g0790 576762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0790 716 Coils Coil 438 458 - -
Hepe08g0790 716 SUPERFAMILY PP2C-like 265 708 IPR036457 -
Hepe08g0790 716 PANTHER PROTEIN PHOSPHATASE 2C 240 707 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Hepe08g0790 716 SMART PP2C_4 252 705 IPR001932 -
Hepe08g0790 716 Pfam Protein phosphatase 2C 536 657 IPR001932 -
Hepe08g0790 716 Pfam Protein phosphatase 2C 440 500 IPR001932 -
Hepe08g0790 716 FunFam probable protein phosphatase 2C 4 226 712 - -
Hepe08g0790 716 ProSiteProfiles PPM-type phosphatase domain profile. 251 707 IPR001932 -
Hepe08g0790 716 Gene3D - 222 712 IPR036457 -
Hepe08g0790 716 MobiDBLite consensus disorder prediction 365 392 - -
Hepe08g0790 716 CDD PP2Cc 433 707 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1451 Hepe-Chr5:63830089 Hepe08g0790 Hepe-Chr8:7084474 3.88e-59 dispersed
Hepe06g1044 Hepe-Chr6:58593479 Hepe08g0790 Hepe-Chr8:7084474 4.04e-151 transposed
Hepe04g0852 Hepe-Chr4:62793736 Hepe08g0790 Hepe-Chr8:7084474 4.54e-237 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0790 - - - 0.0