Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0797 ATGGCTCACTCTTCTCTTCCAATCTTTTTAGATCCCTCAAATTGGCAGCAGTCGAATCAGCTGCCACCGGCAACAAATGATGATCATCAAGACCCACGTCAGCTTCCGGCGGCGTTCCTACCGCCTCCGCCGCCGCCTACGGGTTCTCATGGAGGCGGAATCCGACCGGGTTCGATGGCGTACAGAGCGCGGCTGGCGATGATACCGCAGCCGGAGACGGCACTGAAATGCCCACGTTGTGATTCTACAAACACGAAATTCTGTTATTTCAATAATTACAGCCTTACTCAGCCACGCCATTTCTGTAAAACCTGCCGCCGGTACTGGACCCGCGGCGGCGCTCTTAGAAATGTCCCCGTCGGTGGAGGGTTTCGTAAGAACAAGAAGAAGAAGAAATCTAACCGATCTAAGTCCCCCACTGCCACTCAAACTCAAATGGGTAATTCGAGATCAATTATGGGTGGTGCAATAATCTCTACAAGCTGCAACATTGAGAGCACCACAATGAGCCATTTCCCATCACAGCCATTACAATTACCTTCAATTCCATCTCTTCAACAACATCTTTCTCGTTTTGGAAACAACTCAGGCCTGAACTTCGCCGGAATTCACATCGGAAACATGAATTCAGGCAGAGAATTCGACCAATGGCAGCGATCACAGCAACAACCGCCGTTCATCGTCGCGGGACTCGAACCTCCTCCTCCGATGGCGGCCGCCACATACCCACAAAACCTTCAAAGTGAAGTCAACAACAACAACTTTGAGGCTAACTCATTATCTTTACAATATAATTGTCATCAACAACTTCAGAATTTGACAACTTTTTCGAGAATTCCATCGAAAAACGAACAACAAAATCAAAATCAAAACCAAAATCAAGAACAAGGAATAGTATTATCGAACTTTTTACGACCAGCTGATCAAAACAACCAGTTTTGGGGAGGTGATCATCATCAAAATTCATGGACGGATTTATCAGCTCTCAGCTCATCTTCAAGCAGCCATCTTTTGTAA 1017 46.61 MAHSSLPIFLDPSNWQQSNQLPPATNDDHQDPRQLPAAFLPPPPPPTGSHGGGIRPGSMAYRARLAMIPQPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGFRKNKKKKKSNRSKSPTATQTQMGNSRSIMGGAIISTSCNIESTTMSHFPSQPLQLPSIPSLQQHLSRFGNNSGLNFAGIHIGNMNSGREFDQWQRSQQQPPFIVAGLEPPPPMAAATYPQNLQSEVNNNNFEANSLSLQYNCHQQLQNLTTFSRIPSKNEQQNQNQNQNQEQGIVLSNFLRPADQNNQFWGGDHHQNSWTDLSALSSSSSSHLL 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7152359 7154811 - Hsped.08g07970.1 Hepe08g0797 576769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0797 338 ProSiteProfiles Zinc finger Dof-type profile. 75 129 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe08g0797 338 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 69 291 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g0797 338 Pfam Dof domain, zinc finger 74 129 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe08g0797 338 ProSitePatterns Zinc finger Dof-type signature. 77 113 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe08g0797 338 MobiDBLite consensus disorder prediction 119 150 - -
Hepe08g0797 338 MobiDBLite consensus disorder prediction 1 57 - -
Hepe08g0797 338 MobiDBLite consensus disorder prediction 36 50 - -
Hepe08g0797 338 MobiDBLite consensus disorder prediction 9 27 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0797 Hepe-Chr8:7152359 Hepe08g0855 Hepe-Chr8:7793042 4.86e-34 dispersed
Hepe01g0799 Hepe-Chr1:71828666 Hepe08g0797 Hepe-Chr8:7152359 2.62e-38 wgd
Hepe10g1221 Hepe-Chr10:47279715 Hepe08g0797 Hepe-Chr8:7152359 8.04e-48 wgd
Hepe04g0864 Hepe-Chr4:62891157 Hepe08g0797 Hepe-Chr8:7152359 5.02e-40 wgd
Hepe05g0180 Hepe-Chr5:2229298 Hepe08g0797 Hepe-Chr8:7152359 9.12e-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56156 PF02701 zf-Dof 2.10E-32 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0797 - - - 0.0