Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0830 ATGGATTGTAGAAGAAGATTTGGATTACTCTTATGGGGTTTGTTTATTTCGTTGCTGCCTTGCATTTCTTGTCTGTTTAATCCGGTAGATAATTATCTTATTGACTGTGGATCGCCTGCTAATGTCTCGGTTGGTACTCGTGTTTTCATGGCTGATAATTTGGCCTCAAAGTTGCTTTCCACCCCACAAGTTATTCTGGCTAATACGTCTTCAGTTCCTGCTAGTTCTTCTAATGATTCGTCGCTGTTCCAAACGGCGAGAATCTTCACTGGAACATCAAAATTCAATTTTCCAATCAAGAAGACTGGAAGGCACTGGATCCGTCTCTATTTCTATCCATTTGTGTTTTCTGGCTTCAATATGAGTGCTGCAAATTTTAGTGTTTCGACCCAAAACTTTGTTCTGCTGAGAGATTTGGTTGCAGAGAAGAAACCTTTGGTCAAGGAATTTTCTGTGAATGTAGCATCAGATACACTTGAAGTTGTATTTGCTCCTGTTAATGGCTCCATTGCATATCTGAATGCCATTGAAGTTGTTTCTGTTCCTGACATTCTCATCGCTGATGAAGCCAATTTGTTAGAACCATCTGGTAAATTTCAAGGGCTGTCTACTCTGACATATGAGACAGTTGCTAGGGTTAATATGGGTGGGCCAAAAGTTGCTCCTGATGATGACCCTCTTACGCGAAATTGGGTTTCGGATGAAAGCTTTCTAGTTAATAAGAATTCTGCAACAAGTTTCTCAAACATTGCAGCTGTTAAATACAGTGCTGATGGGGCAGCGCCGGAGATTGCTCCAAATGTTGTCTACGGTAGCCTTACTCAGATGAACTCAAAGGATGATCCGAACAGCAATTTCAATGTGACATGGCAGTTTAAAGTGGATCCCGAGTTTCAGTACCTTGTGCGGTTCCATTTCTGTGACATTGTGAGCAAATCTCTACACCAACTTTATTTCAATGTTTATGTTGACTCGTGGCTGGTTGTTCGGGATTTTGATCTTAGTGTTTCTCTTAGTAATGCCCTGGGCACTCCATACTATATGGACTCTGTTACAGGATTGATCCAGAATGACATACTTCTTGTGAGTATTGGCCCAGCAAACTTAGCCAATGTTTATCCAAATGCCATTCTAAATGGTCTGGAAATCATGAAAATGAACAACTCTGTTGGCAGTCTTAGTGGGGAGGACTCTGTTATTAGTTTTCCAGACTCGACTTCTTCAAATAAGCACATTGGCGTCATTGTGGGCGTGAGCGTTGGGGCATTTGTTGCAGCTGTATTGGTTGGCATTCTGTTTATGTTGTACAGACGAAAAGGAAAGGGAATGCATCAAGCTACATCGAAAACGTGGATTTCAATATCCACTGCTGGAGGAATGTCACACACCATGGGAAGTAAATACTCAAATGGCACAATCACAAGTGTTGCTTCCAACTATGGGTACCGCATACCTTTTGTAACAGTTCAAGAGGCTACGCATAACTTTGATGAGAGCCGGGTTGTTGGCATTGGTGGGTTCGGGAAAGTATACAAAGGAGTTTTAAATGATGGCACCAAAGTTGCTGTGAAGAGGGGTAATCCACTTTCCCAACAAGGACTGACAGAGTTTCAAACCGAAATCGAGATGCTATCACAGTTCCGTCATCGTCATCTTGTTTCATTGATTGGATACTGTGATGAGAGGAATGAGATGATACTGGTTTATGAGTATATGGAACAGGGGACCCTAAAGAGTCATCTATATGGTTCTGATTTCCCTAGTTTGAGTTGGAAGGAGAGACTGGAGGTTTGCATCGGAGCCGCTAGAGGACTTCATTACCTCCACACTAGTCATGCTAAACCAATTATTCATCGTGATGTGAAGTCTGCAAATATTTTACTCGACGATACTCTTATGGCAAAGGTTGCAGACTTTGGGCTTTCGAAAACAGGGCCTGAAATTGACCAAACCCATGTTAGTACAGCTGTGAAAGGAAGTTTTGGGTACCTTGATCCTGAATATTTCAGGAGGCAACAACTGACTGAGAAATCAGATGTTTATTCTTTTGGAGTTGTTTTGTTTGAAGTCCTTTGCGCAAGACCTGTCATAGATCCAACCCTTACTAGAGAAATGGTAAACTTAGCTGAATGGGCAATGAAATGGCAGAAGAGAGGGCAGTTGGACCAAATCATTGATTCTACTCTAGTAGGCAAAGTTAAACCAACTTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGTTTGGCTGACTATGGAGTTGACAGGCCATCTATGGGAGACGTGTTATGGAATTTGGAGTATGCACTTCAGCTACAAGAAGCCGTCATTGAAGCCGATCCTGAAGATAACAGTACAAATATGATTGGCGAGCTCTCTCCTCAAATTAACAATTTCAATGACGATGTCGAAGCAGGTGCTTCTGCCACACGGTTCGACATTCCGGGCGTGGATGATCTTTCTGGAGTCTCAATGAGTAGGGTGTTCTCTCAGCTGGTGAAATCTGAGGGTAGATGA 2517 42.19 MDCRRRFGLLLWGLFISLLPCISCLFNPVDNYLIDCGSPANVSVGTRVFMADNLASKLLSTPQVILANTSSVPASSSNDSSLFQTARIFTGTSKFNFPIKKTGRHWIRLYFYPFVFSGFNMSAANFSVSTQNFVLLRDLVAEKKPLVKEFSVNVASDTLEVVFAPVNGSIAYLNAIEVVSVPDILIADEANLLEPSGKFQGLSTLTYETVARVNMGGPKVAPDDDPLTRNWVSDESFLVNKNSATSFSNIAAVKYSADGAAPEIAPNVVYGSLTQMNSKDDPNSNFNVTWQFKVDPEFQYLVRFHFCDIVSKSLHQLYFNVYVDSWLVVRDFDLSVSLSNALGTPYYMDSVTGLIQNDILLVSIGPANLANVYPNAILNGLEIMKMNNSVGSLSGEDSVISFPDSTSSNKHIGVIVGVSVGAFVAAVLVGILFMLYRRKGKGMHQATSKTWISISTAGGMSHTMGSKYSNGTITSVASNYGYRIPFVTVQEATHNFDESRVVGIGGFGKVYKGVLNDGTKVAVKRGNPLSQQGLTEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILVYEYMEQGTLKSHLYGSDFPSLSWKERLEVCIGAARGLHYLHTSHAKPIIHRDVKSANILLDDTLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLTREMVNLAEWAMKWQKRGQLDQIIDSTLVGKVKPTSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVIEADPEDNSTNMIGELSPQINNFNDDVEAGASATRFDIPGVDDLSGVSMSRVFSQLVKSEGR 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7511904 7514420 + Hsped.08g08300.1 Hepe08g0830 576802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0830 838 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524(InterPro)
Hepe08g0830 838 FunFam Receptor-like protein kinase FERONIA 206 388 - -
Hepe08g0830 838 SMART serkin_6 496 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0830 838 FunFam Receptor-like protein kinase FERONIA 572 787 - -
Hepe08g0830 838 Gene3D Phosphorylase Kinase; domain 1 458 571 - -
Hepe08g0830 838 Gene3D Transferase(Phosphotransferase) domain 1 572 790 - -
Hepe08g0830 838 PANTHER OS07G0166700 PROTEIN 484 774 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Hepe08g0830 838 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0830 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0830 838 CDD STKc_IRAK 502 767 - -
Hepe08g0830 838 SUPERFAMILY Protein kinase-like (PK-like) 472 767 IPR011009 -
Hepe08g0830 838 FunFam Putative receptor-like protein kinase 31 182 - -
Hepe08g0830 838 Pfam Protein tyrosine and serine/threonine kinase 499 694 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0830 838 FunFam receptor-like protein kinase FERONIA 460 571 - -
Hepe08g0830 838 Gene3D - 205 388 - -
Hepe08g0830 838 Gene3D - 31 181 - -
Hepe08g0830 838 Pfam Malectin-like domain 34 385 IPR024788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0857 Hepe-Chr1:72660559 Hepe08g0830 Hepe-Chr8:7511904 7.25e-261 dispersed
Hepe01g1360 Hepe-Chr1:78766674 Hepe08g0830 Hepe-Chr8:7511904 4.16e-283 dispersed
Hepe03g0585 Hepe-Chr3:11529798 Hepe08g0830 Hepe-Chr8:7511904 5.53e-71 dispersed
Hepe05g0997 Hepe-Chr5:45839823 Hepe08g0830 Hepe-Chr8:7511904 1.21e-76 dispersed
Hepe07g0130 Hepe-Chr7:1170293 Hepe08g0830 Hepe-Chr8:7511904 2.85e-243 dispersed
Hepe08g0830 Hepe-Chr8:7511904 Hepe09g0097 Hepe-Chr9:790976 2.17e-240 dispersed
Hepe08g0830 Hepe-Chr8:7511904 Hepe06g0410 Hepe-Chr6:15484148 0.0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73046 PF12819 Malectin_like 9.40E-33 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0830 - - - 0.0