Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0842 ATGGAACCGTTGGATAAACCACTGGCAAAGTCCTCGCCTCTCGCGCCATTTCCTCGCGACTCTCGAGGATCGCTCGAGGTTTTCAATCCCTCGGCCGCCTACTCGTCCCGATCAATCAATCCCATTTCCAAGGCTAACCCGACACGGTCCAATTGGGTGGAGCCACGTAGCAGCGCGGAGTCGGAATCGGGCAGAGTCGGCGGTAAAGCGGCGAGTAAATCCGGCGAGGAGATTACATCATGGATGGCCTTCAAGGACTCAAACTCTTGTTCAGCTTCACCACAAACCTCGTCGCCGCTGGCTCAAAAGACCATATCGGCGATTCTGAGCGACAAATGTCCAGCGGAGAAGCCGAAATCGGGTGGCGAAGTGGGTTCCGCCGCCCAACGCGCGGCGGAGTGGGGATTGGTACTGAAAACAGATACGGAAACAGGGAAGCCGCAGGGGGTCGGAGTTCGAACGTCGGGTGGAGATGAAGCGAATGGTAATACGAAACAGGAGAATTCGAGGAGAAGTTCGAATAACTCGGTGAGGAGTTCGGGCGAGATGTCGGAGGAAGGAGGAAGAGAAAGGGGAATTCCGAGAGTATCGGAGGATTTGAAAGACGCTCTGTCGACATTTCAACAAACATTTGTGGTTTCTGATGCTACGAAACCAGATTATCCGATCATGTATGCAAGTGCTGGATTCTTCAAAATGACTGGCTATACTTCCAAGGAGGTTATCGGAAGAAACTGTCGATTTTTACAGGGATCAGATACAGACCCAGAAGATGTGGCTAAGATTCGAGAGGCTTTACAAGGTGGGACGAGTTACTGTGGGAGGTTATTGAATTACAAGAAAGATGGGACCCCTTATTGGAATCTACTTACTATTTCACCTATCAAAGACGATGACGGCAAAGTTCTCAAATTCATTGGAATGCAAGTGGAGGTGAGCAAACACACAGAGGGCTTCAAAGATAAGATGGTCCGTCCCAATGGCTTGCCAGAATCCTTGATCCGTTATGATGCACGTCAAAAGGAGATGGCTACGAGTTCGGTAACGGAGCTTGTACAGGCGGTGAAAAGGCCTCGGTCTGTAAGTGAATATAGGCATCGGGCTCTAAGTGAATCTATGAACCGTCGATTAGTTAGAAAATCCGGCGGCGGAGGAGGAGGAGACGGCGAAGATAGATCTGAAGGCACAATGGTACGGCGGAAGTCAGAGAGTAGTGCAGTAGCTTCAACCGGAAGAAAATTAAATGGAGGAAATAGAAGGTCGATGCAGCGTATCGTTGAGCTGCCGGAGAAGAAACCCAAAAAGTTTAGCCGTCGTTCATTTATGGGGATCATGAGGAAAAGTCAATCAAATGTCGAAAGCTTCAACATTGAAGATGGTTCCGACGACGATAACGAGACCGATGACGATGAGAGACCAGACAGTGTGGACGACAAAGTAAGGCAGAGGGAAATGAGGAAGGGTATTGATTTAGCTACTACCCTCGAACGTATAGAGAAAAACTTTGTCATTACCGATCCTAGATTGCCCGACAATCCCATTATATTTGCTTCTGATAGCTTCTTGGAGCTAACTGAGTACAGTAGAGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGTCCTGAAACCGATCGAGCAACCGTCAAGAAAATAAGAGATGCAATCGACAACCAAACCGAAGTTACCGTGCAGCTTATTAACTACACAAAAAGCGGTAAGAAATTTTGGAATCTGTTTCATCTACAACCTATGCGTGATCAGAAGGGAGAAGTCCAGTATTTTATTGGAGTACAACTCGACGGTAGTCAGCATGTGGAACCGCTAAGCAATTGCATACCGGAAATGACTGCAAAAGAGGGCGAAAAAACGATAAAAGAAACTGCAGAAAATGTTGATTTGGCGGCTAGAGAACTTCCCGACGCCAATTTGACACCAGAAGATTTATGGGCAAATCATTCTAAGGTGGTTCAACCAAAACCTCACAGAAAGGATAGTCCTTCTTGGAAAGCTATCCAGAAGATTCTAGACAGCGGCGAACCGATAGGACTGAAACATTTCAAGCCAGTTAAACCTTTGGGATCAGGCGACACTGGCAGCGTGCATTTGGTAGAACTGTGTGGGACTGATCAATCTTTTGCAATGAAAGCAATGGATAAGGGTGCTATGCTTAACCGCAACAAGGTGCATAGAGCTTGCGCCGAGAGGGAAATACTCGACATGTTGGATCATCCTTTTCTTCCTGCATTATACGCTTCATTTCAGACAAAAACACATGTTTGTCTTATAACTGATTATTGCCCTGGTGGAGAACTCTTCCTGCTTTTGGACAGACAACCTAAAAAGGTCTTAAAGGAAGATGCTGTAAGGTTTTATGCTGCTGAAGTTATCATCGCATTGGAGTATCTTCATTGTCAAGGGATAATTTATAGGGATTTGAAGCCTGAGAATGTTCTACTCCAAGATAATGGACACGTTGCCTTGACGGATTTTGACTTGTCATGTTTGACTTCTTGCAAACCTCAGCTCTTGCTTCCAACGACAAATGAGAAGAAAAAGCAATCAAGATCTCAACAGGCTCCGATCTTTATGGCCGAACCTATGCGAGCATCGAACTCATTCGTTGGCACTGAAGAGTACATAGCACCGGAAATCATTTCTGGGGCTGGCCATACTAGTGCAGTGGATTGGTGGGCTTTGGGTATCCTTTTATATGAGATGCTCTATGGATACACACCCTTTAGAGGGAAGACAAGGCAAAAGACTTTTTCCAACATTCTTCATAAGGATCTTAAATTTCCAAGAAGTATATCGGCTAGTCTCAATGTCAAGCAGTTAATCTTTAGGTTATTGCATAGAGACCCGAAAAACCGATTGGGTTCTCAAGAAGGAGCTCATGAAATCAAACGACATCCTTTCTTCCGAGGCTTCAATTGGGCGCTCGTTCGTTGCATGAACCCACCGGAGCTGGAAGCGCCTCTTTTCCAGACCACGGATGCCGAAAAAGATGCTATTAAAGCATCAGATTTTGATCTAAAAGAGCTTGAACTGAGTGTTTTCTGA 3066 46.02 MEPLDKPLAKSSPLAPFPRDSRGSLEVFNPSAAYSSRSINPISKANPTRSNWVEPRSSAESESGRVGGKAASKSGEEITSWMAFKDSNSCSASPQTSSPLAQKTISAILSDKCPAEKPKSGGEVGSAAQRAAEWGLVLKTDTETGKPQGVGVRTSGGDEANGNTKQENSRRSSNNSVRSSGEMSEEGGRERGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGSDTDPEDVAKIREALQGGTSYCGRLLNYKKDGTPYWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRSVSEYRHRALSESMNRRLVRKSGGGGGGDGEDRSEGTMVRRKSESSAVASTGRKLNGGNRRSMQRIVELPEKKPKKFSRRSFMGIMRKSQSNVESFNIEDGSDDDNETDDDERPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRATVKKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCIPEMTAKEGEKTIKETAENVDLAARELPDANLTPEDLWANHSKVVQPKPHRKDSPSWKAIQKILDSGEPIGLKHFKPVKPLGSGDTGSVHLVELCGTDQSFAMKAMDKGAMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPKKVLKEDAVRFYAAEVIIALEYLHCQGIIYRDLKPENVLLQDNGHVALTDFDLSCLTSCKPQLLLPTTNEKKKQSRSQQAPIFMAEPMRASNSFVGTEEYIAPEIISGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFSNILHKDLKFPRSISASLNVKQLIFRLLHRDPKNRLGSQEGAHEIKRHPFFRGFNWALVRCMNPPELEAPLFQTTDAEKDAIKASDFDLKELELSVF 1021
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7607966 7619355 - Hsped.08g08420.1 Hepe08g0842 576814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0842 1021 FunFam Putative LOV domain-containing protein 210 366 - -
Hepe08g0842 1021 SMART serkin_6 688 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0842 1021 ProSiteProfiles PAC domain profile. 270 324 IPR000700 -
Hepe08g0842 1021 ProSiteProfiles PAC domain profile. 561 615 IPR000700 -
Hepe08g0842 1021 MobiDBLite consensus disorder prediction 371 478 - -
Hepe08g0842 1021 NCBIfam PAS domain S-box protein 512 602 IPR000014 -
Hepe08g0842 1021 NCBIfam PAS domain S-box protein 223 315 IPR000014 -
Hepe08g0842 1021 CDD PAS 502 602 IPR000014 -
Hepe08g0842 1021 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524(InterPro)
Hepe08g0842 1021 Pfam PAS domain 510 602 IPR000014 -
Hepe08g0842 1021 Pfam PAS domain 217 313 IPR000014 -
Hepe08g0842 1021 ProSiteProfiles Protein kinase domain profile. 688 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0842 1021 MobiDBLite consensus disorder prediction 400 417 - -
Hepe08g0842 1021 Gene3D PAS domain 210 374 - -
Hepe08g0842 1021 Pfam Protein kinase domain 690 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0842 1021 FunFam LOV domain-containing protein 687 771 - -
Hepe08g0842 1021 FunFam Putative LOV domain-containing protein 772 987 - -
Hepe08g0842 1021 MobiDBLite consensus disorder prediction 157 182 - -
Hepe08g0842 1021 PANTHER FLIPPASE KINASE 1-RELATED 642 997 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe08g0842 1021 MobiDBLite consensus disorder prediction 457 473 - -
Hepe08g0842 1021 SMART pac_2 564 606 IPR001610 -
Hepe08g0842 1021 SMART pac_2 273 315 IPR001610 -
Hepe08g0842 1021 CDD PAS 223 312 IPR000014 -
Hepe08g0842 1021 Gene3D Phosphorylase Kinase; domain 1 687 771 - -
Hepe08g0842 1021 CDD STKc_phototropin_like 686 994 - -
Hepe08g0842 1021 SMART pas_2 198 267 IPR000014 -
Hepe08g0842 1021 SMART pas_2 489 558 IPR000014 -
Hepe08g0842 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0842 1021 ProSiteProfiles PAS repeat profile. 491 560 IPR000014 -
Hepe08g0842 1021 FunFam LOV domain-containing protein 476 640 - -
Hepe08g0842 1021 Gene3D PAS domain 475 640 - -
Hepe08g0842 1021 SUPERFAMILY Protein kinase-like (PK-like) 666 996 IPR011009 -
Hepe08g0842 1021 SUPERFAMILY PYP-like sensor domain (PAS domain) 503 602 IPR035965 -
Hepe08g0842 1021 ProSiteProfiles PAS repeat profile. 196 267 IPR000014 -
Hepe08g0842 1021 MobiDBLite consensus disorder prediction 28 58 - -
Hepe08g0842 1021 MobiDBLite consensus disorder prediction 138 194 - -
Hepe08g0842 1021 SUPERFAMILY PYP-like sensor domain (PAS domain) 217 309 IPR035965 -
Hepe08g0842 1021 Gene3D Transferase(Phosphotransferase) domain 1 772 986 - -
Hepe08g0842 1021 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0334 Hepe-Chr2:3193228 Hepe08g0842 Hepe-Chr8:7607966 5.01e-274 dispersed
Hepe08g0842 Hepe-Chr8:7607966 Hepe08g2554 Hepe-Chr8:67162861 6.62e-97 dispersed
Hepe08g0842 Hepe-Chr8:7607966 Hepe08g0359 Hepe-Chr8:3219992 0.0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73047 PF00069 Pkinase 1.80E-63 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0842 K20715 - csv:101214662 1774.21