Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0842 | ATGGAACCGTTGGATAAACCACTGGCAAAGTCCTCGCCTCTCGCGCCATTTCCTCGCGACTCTCGAGGATCGCTCGAGGTTTTCAATCCCTCGGCCGCCTACTCGTCCCGATCAATCAATCCCATTTCCAAGGCTAACCCGACACGGTCCAATTGGGTGGAGCCACGTAGCAGCGCGGAGTCGGAATCGGGCAGAGTCGGCGGTAAAGCGGCGAGTAAATCCGGCGAGGAGATTACATCATGGATGGCCTTCAAGGACTCAAACTCTTGTTCAGCTTCACCACAAACCTCGTCGCCGCTGGCTCAAAAGACCATATCGGCGATTCTGAGCGACAAATGTCCAGCGGAGAAGCCGAAATCGGGTGGCGAAGTGGGTTCCGCCGCCCAACGCGCGGCGGAGTGGGGATTGGTACTGAAAACAGATACGGAAACAGGGAAGCCGCAGGGGGTCGGAGTTCGAACGTCGGGTGGAGATGAAGCGAATGGTAATACGAAACAGGAGAATTCGAGGAGAAGTTCGAATAACTCGGTGAGGAGTTCGGGCGAGATGTCGGAGGAAGGAGGAAGAGAAAGGGGAATTCCGAGAGTATCGGAGGATTTGAAAGACGCTCTGTCGACATTTCAACAAACATTTGTGGTTTCTGATGCTACGAAACCAGATTATCCGATCATGTATGCAAGTGCTGGATTCTTCAAAATGACTGGCTATACTTCCAAGGAGGTTATCGGAAGAAACTGTCGATTTTTACAGGGATCAGATACAGACCCAGAAGATGTGGCTAAGATTCGAGAGGCTTTACAAGGTGGGACGAGTTACTGTGGGAGGTTATTGAATTACAAGAAAGATGGGACCCCTTATTGGAATCTACTTACTATTTCACCTATCAAAGACGATGACGGCAAAGTTCTCAAATTCATTGGAATGCAAGTGGAGGTGAGCAAACACACAGAGGGCTTCAAAGATAAGATGGTCCGTCCCAATGGCTTGCCAGAATCCTTGATCCGTTATGATGCACGTCAAAAGGAGATGGCTACGAGTTCGGTAACGGAGCTTGTACAGGCGGTGAAAAGGCCTCGGTCTGTAAGTGAATATAGGCATCGGGCTCTAAGTGAATCTATGAACCGTCGATTAGTTAGAAAATCCGGCGGCGGAGGAGGAGGAGACGGCGAAGATAGATCTGAAGGCACAATGGTACGGCGGAAGTCAGAGAGTAGTGCAGTAGCTTCAACCGGAAGAAAATTAAATGGAGGAAATAGAAGGTCGATGCAGCGTATCGTTGAGCTGCCGGAGAAGAAACCCAAAAAGTTTAGCCGTCGTTCATTTATGGGGATCATGAGGAAAAGTCAATCAAATGTCGAAAGCTTCAACATTGAAGATGGTTCCGACGACGATAACGAGACCGATGACGATGAGAGACCAGACAGTGTGGACGACAAAGTAAGGCAGAGGGAAATGAGGAAGGGTATTGATTTAGCTACTACCCTCGAACGTATAGAGAAAAACTTTGTCATTACCGATCCTAGATTGCCCGACAATCCCATTATATTTGCTTCTGATAGCTTCTTGGAGCTAACTGAGTACAGTAGAGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGTCCTGAAACCGATCGAGCAACCGTCAAGAAAATAAGAGATGCAATCGACAACCAAACCGAAGTTACCGTGCAGCTTATTAACTACACAAAAAGCGGTAAGAAATTTTGGAATCTGTTTCATCTACAACCTATGCGTGATCAGAAGGGAGAAGTCCAGTATTTTATTGGAGTACAACTCGACGGTAGTCAGCATGTGGAACCGCTAAGCAATTGCATACCGGAAATGACTGCAAAAGAGGGCGAAAAAACGATAAAAGAAACTGCAGAAAATGTTGATTTGGCGGCTAGAGAACTTCCCGACGCCAATTTGACACCAGAAGATTTATGGGCAAATCATTCTAAGGTGGTTCAACCAAAACCTCACAGAAAGGATAGTCCTTCTTGGAAAGCTATCCAGAAGATTCTAGACAGCGGCGAACCGATAGGACTGAAACATTTCAAGCCAGTTAAACCTTTGGGATCAGGCGACACTGGCAGCGTGCATTTGGTAGAACTGTGTGGGACTGATCAATCTTTTGCAATGAAAGCAATGGATAAGGGTGCTATGCTTAACCGCAACAAGGTGCATAGAGCTTGCGCCGAGAGGGAAATACTCGACATGTTGGATCATCCTTTTCTTCCTGCATTATACGCTTCATTTCAGACAAAAACACATGTTTGTCTTATAACTGATTATTGCCCTGGTGGAGAACTCTTCCTGCTTTTGGACAGACAACCTAAAAAGGTCTTAAAGGAAGATGCTGTAAGGTTTTATGCTGCTGAAGTTATCATCGCATTGGAGTATCTTCATTGTCAAGGGATAATTTATAGGGATTTGAAGCCTGAGAATGTTCTACTCCAAGATAATGGACACGTTGCCTTGACGGATTTTGACTTGTCATGTTTGACTTCTTGCAAACCTCAGCTCTTGCTTCCAACGACAAATGAGAAGAAAAAGCAATCAAGATCTCAACAGGCTCCGATCTTTATGGCCGAACCTATGCGAGCATCGAACTCATTCGTTGGCACTGAAGAGTACATAGCACCGGAAATCATTTCTGGGGCTGGCCATACTAGTGCAGTGGATTGGTGGGCTTTGGGTATCCTTTTATATGAGATGCTCTATGGATACACACCCTTTAGAGGGAAGACAAGGCAAAAGACTTTTTCCAACATTCTTCATAAGGATCTTAAATTTCCAAGAAGTATATCGGCTAGTCTCAATGTCAAGCAGTTAATCTTTAGGTTATTGCATAGAGACCCGAAAAACCGATTGGGTTCTCAAGAAGGAGCTCATGAAATCAAACGACATCCTTTCTTCCGAGGCTTCAATTGGGCGCTCGTTCGTTGCATGAACCCACCGGAGCTGGAAGCGCCTCTTTTCCAGACCACGGATGCCGAAAAAGATGCTATTAAAGCATCAGATTTTGATCTAAAAGAGCTTGAACTGAGTGTTTTCTGA | 3066 | 46.02 | MEPLDKPLAKSSPLAPFPRDSRGSLEVFNPSAAYSSRSINPISKANPTRSNWVEPRSSAESESGRVGGKAASKSGEEITSWMAFKDSNSCSASPQTSSPLAQKTISAILSDKCPAEKPKSGGEVGSAAQRAAEWGLVLKTDTETGKPQGVGVRTSGGDEANGNTKQENSRRSSNNSVRSSGEMSEEGGRERGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGSDTDPEDVAKIREALQGGTSYCGRLLNYKKDGTPYWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRSVSEYRHRALSESMNRRLVRKSGGGGGGDGEDRSEGTMVRRKSESSAVASTGRKLNGGNRRSMQRIVELPEKKPKKFSRRSFMGIMRKSQSNVESFNIEDGSDDDNETDDDERPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRATVKKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCIPEMTAKEGEKTIKETAENVDLAARELPDANLTPEDLWANHSKVVQPKPHRKDSPSWKAIQKILDSGEPIGLKHFKPVKPLGSGDTGSVHLVELCGTDQSFAMKAMDKGAMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPKKVLKEDAVRFYAAEVIIALEYLHCQGIIYRDLKPENVLLQDNGHVALTDFDLSCLTSCKPQLLLPTTNEKKKQSRSQQAPIFMAEPMRASNSFVGTEEYIAPEIISGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFSNILHKDLKFPRSISASLNVKQLIFRLLHRDPKNRLGSQEGAHEIKRHPFFRGFNWALVRCMNPPELEAPLFQTTDAEKDAIKASDFDLKELELSVF | 1021 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7607966 | 7619355 | - | Hsped.08g08420.1 | Hepe08g0842 | 576814 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0842 | 1021 | FunFam | Putative LOV domain-containing protein | 210 | 366 | - | - | |
Hepe08g0842 | 1021 | SMART | serkin_6 | 688 | 975 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0842 | 1021 | ProSiteProfiles | PAC domain profile. | 270 | 324 | IPR000700 | - | |
Hepe08g0842 | 1021 | ProSiteProfiles | PAC domain profile. | 561 | 615 | IPR000700 | - | |
Hepe08g0842 | 1021 | MobiDBLite | consensus disorder prediction | 371 | 478 | - | - | |
Hepe08g0842 | 1021 | NCBIfam | PAS domain S-box protein | 512 | 602 | IPR000014 | - | |
Hepe08g0842 | 1021 | NCBIfam | PAS domain S-box protein | 223 | 315 | IPR000014 | - | |
Hepe08g0842 | 1021 | CDD | PAS | 502 | 602 | IPR000014 | - | |
Hepe08g0842 | 1021 | ProSitePatterns | Protein kinases ATP-binding region signature. | 694 | 717 | IPR017441 | GO:0005524(InterPro) | |
Hepe08g0842 | 1021 | Pfam | PAS domain | 510 | 602 | IPR000014 | - | |
Hepe08g0842 | 1021 | Pfam | PAS domain | 217 | 313 | IPR000014 | - | |
Hepe08g0842 | 1021 | ProSiteProfiles | Protein kinase domain profile. | 688 | 975 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0842 | 1021 | MobiDBLite | consensus disorder prediction | 400 | 417 | - | - | |
Hepe08g0842 | 1021 | Gene3D | PAS domain | 210 | 374 | - | - | |
Hepe08g0842 | 1021 | Pfam | Protein kinase domain | 690 | 975 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0842 | 1021 | FunFam | LOV domain-containing protein | 687 | 771 | - | - | |
Hepe08g0842 | 1021 | FunFam | Putative LOV domain-containing protein | 772 | 987 | - | - | |
Hepe08g0842 | 1021 | MobiDBLite | consensus disorder prediction | 157 | 182 | - | - | |
Hepe08g0842 | 1021 | PANTHER | FLIPPASE KINASE 1-RELATED | 642 | 997 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Hepe08g0842 | 1021 | MobiDBLite | consensus disorder prediction | 457 | 473 | - | - | |
Hepe08g0842 | 1021 | SMART | pac_2 | 564 | 606 | IPR001610 | - | |
Hepe08g0842 | 1021 | SMART | pac_2 | 273 | 315 | IPR001610 | - | |
Hepe08g0842 | 1021 | CDD | PAS | 223 | 312 | IPR000014 | - | |
Hepe08g0842 | 1021 | Gene3D | Phosphorylase Kinase; domain 1 | 687 | 771 | - | - | |
Hepe08g0842 | 1021 | CDD | STKc_phototropin_like | 686 | 994 | - | - | |
Hepe08g0842 | 1021 | SMART | pas_2 | 198 | 267 | IPR000014 | - | |
Hepe08g0842 | 1021 | SMART | pas_2 | 489 | 558 | IPR000014 | - | |
Hepe08g0842 | 1021 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 809 | 821 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe08g0842 | 1021 | ProSiteProfiles | PAS repeat profile. | 491 | 560 | IPR000014 | - | |
Hepe08g0842 | 1021 | FunFam | LOV domain-containing protein | 476 | 640 | - | - | |
Hepe08g0842 | 1021 | Gene3D | PAS domain | 475 | 640 | - | - | |
Hepe08g0842 | 1021 | SUPERFAMILY | Protein kinase-like (PK-like) | 666 | 996 | IPR011009 | - | |
Hepe08g0842 | 1021 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 503 | 602 | IPR035965 | - | |
Hepe08g0842 | 1021 | ProSiteProfiles | PAS repeat profile. | 196 | 267 | IPR000014 | - | |
Hepe08g0842 | 1021 | MobiDBLite | consensus disorder prediction | 28 | 58 | - | - | |
Hepe08g0842 | 1021 | MobiDBLite | consensus disorder prediction | 138 | 194 | - | - | |
Hepe08g0842 | 1021 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 217 | 309 | IPR035965 | - | |
Hepe08g0842 | 1021 | Gene3D | Transferase(Phosphotransferase) domain 1 | 772 | 986 | - | - | |
Hepe08g0842 | 1021 | MobiDBLite | consensus disorder prediction | 1 | 77 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0334 | Hepe-Chr2:3193228 | Hepe08g0842 | Hepe-Chr8:7607966 | 5.01e-274 | dispersed | |
Hepe08g0842 | Hepe-Chr8:7607966 | Hepe08g2554 | Hepe-Chr8:67162861 | 6.62e-97 | dispersed | |
Hepe08g0842 | Hepe-Chr8:7607966 | Hepe08g0359 | Hepe-Chr8:3219992 | 0.0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73047 | PF00069 | Pkinase | 1.80E-63 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0842 | K20715 | - | csv:101214662 | 1774.21 |