Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0844 ATGGGTTGCTTTCGCCCTAGCAAAAAACAGAGGAAAAGATTAACGGGCACTTCGCCATGCATTCCACCGGCTTCTTCAGCTGTTGCAGAAACAGTAAATTTAAAGGCGAATTTGAATGTAAAAACAGGGGAAGAAGAAGTAAAAGAGTTGGTTTGTGAAAATGACCAGCTGGCGTCAAATACAAACAAAGAGGTTTACAGGAATGCAAAATCAAACGATGAGATAGAAACATTTACATTCCACGAACTTGTAGCAGCAACTAGAAATTTCAAGTCGGATTGCTTTCTCGGTGAAGGGGGATTTGGTAAAGTTTACAAGGGCTATTTGGAAAGAATTAACAAGCTTGTAGCCGTCAAGCAACTTGACCGCAATGGGCTTCAAGGGGTAAGAGAATTCGTGGTGGAAGTGCTGACGTTAAGTTTGGCCAATCACCCAAATCTTGTAAAATTGTTAGGCTATTGTGCAGAGGGGGAGCAAAGACTCTTGGTCTATGAGTTCATGCCATTAGAATCATTGGACAAACATTTGCACGATCTTTCAAAAAGCAAAAAAGCGCTTGATTGGAATACAAGAATGAAGATAGCAGTGGGTGCAGCAAAGGGATTGGAGTACTTGCACAACAAAATGAGACCTGCAGTTATATATAGAGATCTAAAATGCTCAAACATTTTGCTCGACAAAGAATATTGGCCAAAGCTCTCAGATTTTGGTCTAGCCAAAGTAGGTCCGAGTGGAGATAACACACATGTTTCTACTAGAGTCATGGGAACCTATGGATATTGTGCACCAGATTATGCAATGACGGGCCAATTGACCTTCAAATGTGACATCTATAGCTTTGGTGTCCTTCTCTTGGAACTCATCACGGGTAGAAAAGCCATTGACCATACAAAGCCCCCAAAGGAGCTAAGTTTGGTAGCTTGGGCAAAACCATTGTTTCGAGATCGAAAGAGATTCTTGATAATGGCGGATCCAAGGCTCGAAGGTCAATATCCTATTAGAGGGTTGTATCAATCTCTTGCGATTGCAGCAATGTGTCTCCAGGAGCAAGCTGCTATGAGGCCAGTAATATCAGAAGTGGTCAGTGCTCTAGATTTCCTTGCTTCCCAAAAGTATACAGAAAGAAGGAGGATCGCCATGGATTAG 1146 42.15 MGCFRPSKKQRKRLTGTSPCIPPASSAVAETVNLKANLNVKTGEEEVKELVCENDQLASNTNKEVYRNAKSNDEIETFTFHELVAATRNFKSDCFLGEGGFGKVYKGYLERINKLVAVKQLDRNGLQGVREFVVEVLTLSLANHPNLVKLLGYCAEGEQRLLVYEFMPLESLDKHLHDLSKSKKALDWNTRMKIAVGAAKGLEYLHNKMRPAVIYRDLKCSNILLDKEYWPKLSDFGLAKVGPSGDNTHVSTRVMGTYGYCAPDYAMTGQLTFKCDIYSFGVLLLELITGRKAIDHTKPPKELSLVAWAKPLFRDRKRFLIMADPRLEGQYPIRGLYQSLAIAAMCLQEQAAMRPVISEVVSALDFLASQKYTERRRIAMD 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7634863 7639194 - Hsped.08g08440.1 Hepe08g0844 576816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0844 381 ProSiteProfiles Protein kinase domain profile. 90 367 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0844 381 SUPERFAMILY Protein kinase-like (PK-like) 75 372 IPR011009 -
Hepe08g0844 381 FunFam probable serine/threonine-protein kinase RLCKVII 61 166 - -
Hepe08g0844 381 CDD STKc_IRAK 96 365 - -
Hepe08g0844 381 PANTHER OS07G0668900 PROTEIN 50 374 - -
Hepe08g0844 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0844 381 Gene3D Phosphorylase Kinase; domain 1 51 166 - -
Hepe08g0844 381 SMART serkin_6 90 367 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0844 381 Gene3D Transferase(Phosphotransferase) domain 1 167 380 - -
Hepe08g0844 381 Coils Coil 40 60 - -
Hepe08g0844 381 FunFam Serine/threonine-protein kinase PBS1 167 381 - -
Hepe08g0844 381 Pfam Protein kinase domain 95 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0844 381 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0844 Hepe-Chr8:7634863 Hepe10g1128 Hepe-Chr10:44681528 1.18e-179 dispersed
Hepe05g0223 Hepe-Chr5:2634612 Hepe08g0844 Hepe-Chr8:7634863 5.65e-144 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73048 PF00069 Pkinase 2.00E-42 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0844 - - - 0.0