Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0853 ATGGACGAGTTCTTGGACAATATACCGCCCATGGATCTGATGCGTTCCGAGAAGATGAGTTTTGTCCAGCTTATCATCCCCGTCGAGTCCGCTCATCGAGCCATTTCGTACCTTGGCGAGCTTGGCATCCTTCAATTCAGAGATTTAAACGTGGACAAAAGTCCTTTCCAGAGAACATTTGTTAACCAGGTAAAGCGATGTGCAGAGATGTCAAGGAAGTTGAGATTTTTCAAAGATCAAATCAATAAAGCTGGTGTACTGTCATCTACACGACCAATACTTCAAGAACACATTGAGCTAGAGGATTTAGAGATACGACTAGCTGATCATGAGCATGAGCTGATTGAAATGAACTCTAACAGCGAGAAACTTCGACAGTCATTCAATGAACTCTTAGAATTCAAGATGGTATTGCAAAAGGCAAGCGTCTTTCTGGTGTCCAGTAATAGCCATTCAGTTTCAGAAGAAAGGGAGTTGAGTGAAAATGTTTTCTTGAATGATAACTATGTTCATGATGGATCATTACTTGAACAGGAAATGAGACCTGGACCGTCCAACCAATCTGGTTTGAGATTTATTTGTGGAATTATTTGTAAATCCAAGGTTCTTAGATTTGAAAGGATGCTGTTTCGTGCAACAAGGGGAAATATGCTTTTCAATCAGGCACCAGCAGATGTACAGATCATGGATCCCATATCTATGGAAATGGTTGAGAAAACAGTATTTGTAGTGTTTTTCTCTGGGGAGCAGGCCAGAAATAAAGTTTTGAAGATCTGTGAGGCTTTTGGAGCAAATTGCTATCCCGTTCCTGAAGATATAACCAAACAAAGGCAGATAATTAGAGAAGTTTCATCTCGCCTCACTGATCTTGAAGCCACTTTAGATGCTGGGACCCGTCACCGAAATGAGGCTCTTGCATCGATAGGGTTTCACCTTATTAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATACGATACATTGAACATGTTGAATTTTGATGTCACTAAAAAATGTCTTGTTGGAGAAGGCTGGTGCCCAATCTTTGCAAAAACTGAGATTCAGGAGGCACTGCAACGAGCAACATTTGATAGCAGTTCACAAGTGGGCACAATATTTCATGTGATGGATACGGTTGAATCCCCTCCTACATATTTTAGAACAAATCGTTTGACAAGTGCTTTTCAGGAAATTGTTGATGCCTATGGTGTTGCTAGATATCAAGAAGCAAATCCTGCAGTTTACACTGTTATTACATTTCCGTTCCTATTCGCAGTGATGTTTGGAGATTGGGGTCATGGAATATGCTTGTTGCTTGGAGCTTTATTTCTTATAGCTCGTGAAAGCAAGCTCAATAATCAGAAATTAGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTTCTTCTTTTGATGTCCCTATTTTCAATTTATTGTGGGTTGATCTACAATGAGTTCTTCTCTGTTCCATATCATATATTTGGTGCGTCTGCTTACAAGTGTCGCGATAATTCATGCAGTGATGCATACACTGTTGGGTTAATTAAATACCGTGGTGCCTATCCATTTGGTGTTGACCCGAGTTGGCGTGGAAGTCGTTCAGAACTTCCTTTTCTGAACTCTCTTAAAATGAAGTTGTCTATCTTGTTGGGTATTGCCCAAATGAACTTAGGGATCATTATGAGTTATTTTAATGCACGTTTTACTGGAAGCTCAATTGATATCAGGTACCAGTTTATACCACAAGTGATCTTTCTTAACAGCCTTTTTGGATATCTTTCTCTTCTCATTCTCCTCAAGTGGTGCACTGGATCTCAAGCAGACCTTTATCATGTGATGATTTACATGTTTTTAAGTCCATTTGAAGATCTTGGTGAGAACGAATTGTTTTGGGGCCAGAGACCTCTTCAAATTATCTTGTTGATGTTGGCTGTAGTTGCAGTGCCTTGGATGCTTTTTCCTAAACCCTTTATTTTGAAAAAGATTCACACAGAGAGATTTCAAGGTCGTACATATGGGGTGCTTGGAACCTCTGAGATTGATCTTGAGGCCGAACCTGATTCGGCAAGGCAACACCAAGAAGACTTCAATTTTAGTGAGATCTTTGTTCACCAAATGATTCACTCCATAGAATTCGTCTTGGGTGCAGTTTCAAATACAGCATCGTATCTCCGACTTTGGGCTTTAAGCTTGGCGCACTCAGAACTGTCAACAGTTTTCTATGAGAAAGTACTCCTCCTAGCTTGGGGGTATGACAGCTTTGTAATCCGGCTGATTGGTTTGGCTGTTTTTTCTTTTGCCACTGCTTTCATACTTCTTATGATGGAGACCCTTAGCGCCTTCCTTCATGCCTTGCGTCTTCATTGGGTTGAGTTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAAACCTTTTTCCTTTGCCTCTCTCGATGAGGATGAAGATTAA 2460 40.45 MDEFLDNIPPMDLMRSEKMSFVQLIIPVESAHRAISYLGELGILQFRDLNVDKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGVLSSTRPILQEHIELEDLEIRLADHEHELIEMNSNSEKLRQSFNELLEFKMVLQKASVFLVSSNSHSVSEERELSENVFLNDNYVHDGSLLEQEMRPGPSNQSGLRFICGIICKSKVLRFERMLFRATRGNMLFNQAPADVQIMDPISMEMVEKTVFVVFFSGEQARNKVLKICEAFGANCYPVPEDITKQRQIIREVSSRLTDLEATLDAGTRHRNEALASIGFHLIKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTEIQEALQRATFDSSSQVGTIFHVMDTVESPPTYFRTNRLTSAFQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALFLIARESKLNNQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDNSCSDAYTVGLIKYRGAYPFGVDPSWRGSRSELPFLNSLKMKLSILLGIAQMNLGIIMSYFNARFTGSSIDIRYQFIPQVIFLNSLFGYLSLLILLKWCTGSQADLYHVMIYMFLSPFEDLGENELFWGQRPLQIILLMLAVVAVPWMLFPKPFILKKIHTERFQGRTYGVLGTSEIDLEAEPDSARQHQEDFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDSFVIRLIGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFASLDEDED 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7745608 7757872 - Hsped.08g08530.1 Hepe08g0853 576825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0853 819 PANTHER VACUOLAR PROTON ATPASES 11 817 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
Hepe08g0853 819 Pfam V-type ATPase 116kDa subunit family 37 811 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Hepe08g0853 819 Coils Coil 93 127 - -
Hepe08g0853 819 PIRSF ATP6V0A1 9 819 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0483 Hepe-Chr2:4720585 Hepe08g0853 Hepe-Chr8:7745608 5.31e-265 dispersed
Hepe08g0853 Hepe-Chr8:7745608 Hepe10g0122 Hepe-Chr10:1207675 6.73e-320 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0853 K02154 - csv:101216514 1577.76