Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0878 | ATGACCGTAATCGACGTCATCTTCCGAGTCGATTCTATTTGCAAGAAATACGAGAAGTATGATGTCGAGAAACAGCGCGAGGACAATGCCTATGGTGACGATGCCTTTGCTCGCCTCTTCGCCGCCGTCGAATTCGAAATCGACGCCGCTCTCCAGAAATCTGAGGTTGCCTCATCCGAGAAGAATAGGGCTGCTGCAGTTGCGATGAACGCCGAGGTTCGCCGGAAGAAGGCTCGATTGATGGATGAAGTTCCCAAGCTGCGTAAATTGGCTCACAAGAAGGTTAAAGGGGTTCCGAAAGAAGAGCTTGAGGTCAGAGATGATCTTGTTATTGGGCTTGAAGAGAGGATTAAAGCGATACCAGATGGAAGTACCGCAGGAAACAAACAATCTGGAGGACGGGCGTCCTCTTCGTCATCTAACAAAATCGTGTTTGATTCATCAGATGAAAACTATGATGGCGGGTATTTCCAGAAAAGTGAAGAATCAAGTCAATTTCGAAACGAGTATGAAATGCGGAAGATGAAACAGGACCAAGGTCTCGATGTCATATCTGAGGGGTTGGATATGCTTAAAAATCTGGCCCATGATATGAGTGAGGAAATGGACAGGCAAGTTCCATTAATTGACGAGATCGACGCAAAGGTAGACAAGGTGACTAATGAGATTAAAAATACCAATGTTAGGCTCAAGCAAACGCTCAATGAGGTGAGATCCAGCCAAAACTTCTGCATCGATATCATTCTTCTCTGTGTAATTCTTGGAATCGCCTCTTACTTGTACAATCGCAGTCGAAACACGAGCAAATCTGGCTAA | 816 | 45.47 | MTVIDVIFRVDSICKKYEKYDVEKQREDNAYGDDAFARLFAAVEFEIDAALQKSEVASSEKNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRDDLVIGLEERIKAIPDGSTAGNKQSGGRASSSSSNKIVFDSSDENYDGGYFQKSEESSQFRNEYEMRKMKQDQGLDVISEGLDMLKNLAHDMSEEMDRQVPLIDEIDAKVDKVTNEIKNTNVRLKQTLNEVRSSQNFCIDIILLCVILGIASYLYNRSRNTSKSG | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7978212 | 7980605 | + | Hsped.08g08780.1 | Hepe08g0878 | 576850 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0878 | 271 | Gene3D | - | 171 | 232 | - | - | |
Hepe08g0878 | 271 | PANTHER | SYNAPTOSOMAL ASSOCIATED PROTEIN | 123 | 235 | - | GO:0005886(PANTHER) | |
Hepe08g0878 | 271 | MobiDBLite | consensus disorder prediction | 124 | 144 | - | - | |
Hepe08g0878 | 271 | MobiDBLite | consensus disorder prediction | 121 | 144 | - | - | |
Hepe08g0878 | 271 | CDD | SNARE_Qc | 176 | 232 | - | - | |
Hepe08g0878 | 271 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 171 | 233 | IPR000727 | - | |
Hepe08g0878 | 271 | SUPERFAMILY | SNARE fusion complex | 167 | 231 | - | - | |
Hepe08g0878 | 271 | Coils | Coil | 209 | 236 | - | - | |
Hepe08g0878 | 271 | Pfam | SNARE domain | 208 | 257 | IPR000727 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0250 | Hepe-Chr5:2954767 | Hepe08g0878 | Hepe-Chr8:7978212 | 1.18e-115 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0878 | K08506 | - | csv:101211289 | 441.81 |