Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0878 ATGACCGTAATCGACGTCATCTTCCGAGTCGATTCTATTTGCAAGAAATACGAGAAGTATGATGTCGAGAAACAGCGCGAGGACAATGCCTATGGTGACGATGCCTTTGCTCGCCTCTTCGCCGCCGTCGAATTCGAAATCGACGCCGCTCTCCAGAAATCTGAGGTTGCCTCATCCGAGAAGAATAGGGCTGCTGCAGTTGCGATGAACGCCGAGGTTCGCCGGAAGAAGGCTCGATTGATGGATGAAGTTCCCAAGCTGCGTAAATTGGCTCACAAGAAGGTTAAAGGGGTTCCGAAAGAAGAGCTTGAGGTCAGAGATGATCTTGTTATTGGGCTTGAAGAGAGGATTAAAGCGATACCAGATGGAAGTACCGCAGGAAACAAACAATCTGGAGGACGGGCGTCCTCTTCGTCATCTAACAAAATCGTGTTTGATTCATCAGATGAAAACTATGATGGCGGGTATTTCCAGAAAAGTGAAGAATCAAGTCAATTTCGAAACGAGTATGAAATGCGGAAGATGAAACAGGACCAAGGTCTCGATGTCATATCTGAGGGGTTGGATATGCTTAAAAATCTGGCCCATGATATGAGTGAGGAAATGGACAGGCAAGTTCCATTAATTGACGAGATCGACGCAAAGGTAGACAAGGTGACTAATGAGATTAAAAATACCAATGTTAGGCTCAAGCAAACGCTCAATGAGGTGAGATCCAGCCAAAACTTCTGCATCGATATCATTCTTCTCTGTGTAATTCTTGGAATCGCCTCTTACTTGTACAATCGCAGTCGAAACACGAGCAAATCTGGCTAA 816 45.47 MTVIDVIFRVDSICKKYEKYDVEKQREDNAYGDDAFARLFAAVEFEIDAALQKSEVASSEKNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRDDLVIGLEERIKAIPDGSTAGNKQSGGRASSSSSNKIVFDSSDENYDGGYFQKSEESSQFRNEYEMRKMKQDQGLDVISEGLDMLKNLAHDMSEEMDRQVPLIDEIDAKVDKVTNEIKNTNVRLKQTLNEVRSSQNFCIDIILLCVILGIASYLYNRSRNTSKSG 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7978212 7980605 + Hsped.08g08780.1 Hepe08g0878 576850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0878 271 Gene3D - 171 232 - -
Hepe08g0878 271 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 123 235 - GO:0005886(PANTHER)
Hepe08g0878 271 MobiDBLite consensus disorder prediction 124 144 - -
Hepe08g0878 271 MobiDBLite consensus disorder prediction 121 144 - -
Hepe08g0878 271 CDD SNARE_Qc 176 232 - -
Hepe08g0878 271 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Hepe08g0878 271 SUPERFAMILY SNARE fusion complex 167 231 - -
Hepe08g0878 271 Coils Coil 209 236 - -
Hepe08g0878 271 Pfam SNARE domain 208 257 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0250 Hepe-Chr5:2954767 Hepe08g0878 Hepe-Chr8:7978212 1.18e-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0878 K08506 - csv:101211289 441.81