Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0886 ATGGGGAAGGACGTCGAGGTTGTCGAGCAAGGCGAATTCCAAACCAAAGACTACCAAGACCCACCTCCCGCTCCTCTCATCGACCCCGACGAGCTCACCAAATGGTCCCTCTACCGAGCCGTCATCGCCGAGTTCATCGCCACTCTCCTCTTCCTCTACGTCACCGTCTTGACCGTCATCGGCTACTCCCACCAGAGTGATCCATCCGTAACCACCGACCCCTGTAGCGGCGTCGGCATCCTCGGTATCGCATGGGCTTTCGGCGGCATGATCTTCATCCTAGTCTACTGCACCGCCGGTATCTCTGGTGGACACATAAACCCAGCGGTGACATTTGGGCTATTTTTGGCGAGAAAAGTGTCATTGGTTAGGGCTTTGTTGTACATAATTGCACAGTGTGCTGGTGCTATATGTGGGTGTGGATTGGTGAAGGCTTTCCAATCTGCTTACTACGATAGATATAATGGTGGGGCCAATATGCTTGCTAATGGATACAATAAAGGCACTGGATTGGGAGCTGAAATCATCGGTACTTTTGTTCTTGTTTACACTGTCTTTGCTGCCACTGATCCCAAGAGAAACGCCAGAGATTCCCATGTTCCTGTATTGGCACCACTCCCAATTGGATTTGCAGTGTTTATGGTGCACTTAGCTACAATTCCCATTACTGGAACTGGAATTAACCCTGCAAGAAGTTTTGGAGCTGCTGTGATTTTCAACAAAGAGAAAGCTTGGGATGACCAATGGATTTTCTGGGTTGGACCATTTATTGGAGCTGCAATTGCTGCAATTTACCACCAGTATGTACTCAGAGCCGGGGCTATTAAAGCTCTTGGATCCTTCAGGAGCAACGCTTGA 858 49.42 MGKDVEVVEQGEFQTKDYQDPPPAPLIDPDELTKWSLYRAVIAEFIATLLFLYVTVLTVIGYSHQSDPSVTTDPCSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCAGAICGCGLVKAFQSAYYDRYNGGANMLANGYNKGTGLGAEIIGTFVLVYTVFAATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKEKAWDDQWIFWVGPFIGAAIAAIYHQYVLRAGAIKALGSFRSNA 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8024237 8025344 - Hsped.08g08860.1 Hepe08g0886 576858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0886 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 3 283 IPR034294 GO:0005886(PANTHER)|GO:0015250(PANTHER)
Hepe08g0886 285 NCBIfam MIP family channel protein 43 265 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe08g0886 285 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe08g0886 285 SUPERFAMILY Aquaporin-like 31 271 IPR023271 -
Hepe08g0886 285 CDD MIP 39 269 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe08g0886 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Hepe08g0886 285 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe08g0886 285 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe08g0886 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe08g0886 285 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe08g0886 285 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe08g0886 285 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe08g0886 285 FunFam Probable aquaporin PIP1-2 24 285 - -
Hepe08g0886 285 ProSitePatterns MIP family signature. 105 113 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0730 Hepe-Chr1:70284768 Hepe08g0886 Hepe-Chr8:8024237 1.08e-140 dispersed
Hepe02g0419 Hepe-Chr2:3998850 Hepe08g0886 Hepe-Chr8:8024237 5.54e-154 dispersed
Hepe04g0931 Hepe-Chr4:63591221 Hepe08g0886 Hepe-Chr8:8024237 4.62e-142 dispersed
Hepe04g0932 Hepe-Chr4:63598978 Hepe08g0886 Hepe-Chr8:8024237 2.08e-173 dispersed
Hepe04g0933 Hepe-Chr4:63602108 Hepe08g0886 Hepe-Chr8:8024237 4.64e-106 dispersed
Hepe06g1536 Hepe-Chr6:66057199 Hepe08g0886 Hepe-Chr8:8024237 1.82e-142 dispersed
Hepe08g0300 Hepe-Chr8:2705016 Hepe08g0886 Hepe-Chr8:8024237 1.14e-141 dispersed
Hepe08g0886 Hepe-Chr8:8024237 Hepe10g0358 Hepe-Chr10:3917491 7.17e-26 dispersed
Hepe02g2960 Hepe-Chr2:78862804 Hepe08g0886 Hepe-Chr8:8024237 8.71e-159 wgd
Hepe05g0256 Hepe-Chr5:3034094 Hepe08g0886 Hepe-Chr8:8024237 2.96e-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0886 K09872 - csv:101215300 539.265