Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0898 | ATGAGATTGAATCCATTAGAACTGCAGCCAAAGCCAAAGGTTTCATTTGGGAAGATCTTTATGGCTTATGGTAGTTCTAGATCTGTAAGATTCCAAGATGATCTTGAAACATCTGCCCTGCCTACAATCAATGGCGGTGGCGTGACGAAGATCATATACAACATTGATGGCACACAAATACCTGAATCAAGCGGAAAGAGAACTGAGGTTTCTGGGAAGTTTGGAAGATCCTTGCGAGCTAAAGTTTTGTCTAGAGTTTTCTCTGAGGATTATGAGAGAGTGCAGAGAAAAATATTGGATCCTAGGGGACAAGTCATAAGGCGATGGAATAAGATCTTTTTAGTAGCTTGTTTAGTCTCTTTGTTTGTAGACCCGCTTTTCTTTTACTTGCCTGTGGTCCGGGATGAAGTGTGCATCGATATAGGAGTAGGTCTCGAAGTCGTCCTCACAACTATAAGATCAATAGCTGATGTTTTCTACACAATTCAGATTTTCATTAAGTTCCGTACAGCTTATGTTGCGCCATCTTCTCGTGTATTTGGGAGAGGAGAGCTTGTTATAGATCCTTGTAAGATAGCAATAAGGTATCTATTGCATGGTTTCTGGATCGATTTCATTGCAGCCCTGCCAGTTCCTCAGGTACTGATCTGGATTGTCATCCCCAACCTTAGTGGTTCAACAATGACAAACACCAAGAACTTCCTAAGGTTCTTTCTCATATTCCAGTACCTCCCAAGGCTTTTTCTCATATTTCCTCTCTCAACACAAATTGTTAAGGCTACTGGACTTGTGACACAAACAGCATGGGCTGGAGCTGCTTATAACCTGATTCTTTATATGTTGGCAAGCCATGTTTTAGGATCCTGCTGGTACCTTCTTTCAATCGAGCGACAAGAAGCATGCTGGAGAAAACTTTGTACGCTTGATGAATCTTGTAAAGATGGATTCTTCGACTGTCATAAGGTCGATGACCCTCAAAGGGACTCATGGTTTAAGACGAGCAACATTACAAATTCGTGCAATCCAAATGATCCCTTTTATCAATTTGGTATATACGGTGATGCAATAACTTTTCATGTCACAACCTCACCATTTTTCAACAAGTACTTCTACTGTCTTTGGTGGGGCCTGAAAAATCTGAGTTCCTTGGGACAAAATCTTGCCACAAGCACTTTTGTTGGGGAAATTATATTTGCCATAATTATGGCAACTCTTGGACTGGTTCTGTTTGCATTGCTCATTGGCAATATGCAGAAATACCTCCAATCGACGACTGTTCGGTTAGAAGAGTGGAGAATAAGGAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCCAGAGCTCAGACAGTCTGTCCGCAGATATGATCAGTATAAGTGGGTAGCAACTCGAGGAGTCGATGAAGAATCCCTGCTTAGAAGTCTTCCATTGGATCTCCGAAGAGACATAAAACGTCACCTTTGCCTCGACCTCGTTCGAAGGGTTCCATTGTTTGATCAAATGGATGAAAGAATGCTAGATGCAATATGCGAGAGACTTAAACCTGCCTTGAGCACAGAAGGCACATTTCTCGTGCGAGAAGGCGACCCGGTCAATGAAATGCTATTCATAATCAGAGGTCATCTCGATTCGTACACCACTAATGGTGGTAGAACCGGATTTTTCAACTCCTGTCGTATCGGCCCGGGTGATTTCTGTGGTGAGGAGCTGCTGACTTGGGCTCTCGACCCTCGTCCCAGTGTTGTACTTCCTTCTTCCACTCGCACGGTCAAAGCCATCTCTGAAGTAGAAGCATTTGCTCTCATAGCAGATGACTTGAAATTTGTATCCTCCCAGTTCAGAAGACTCCACAGCAAACAACTGAGACACAAGTTTCGATTCTACTCGCATCAGTGGCGAACATGGGCCGCGTGCTTTGTTCAAGCAGCATGGCGGCGATATAAGAGACGCAAAGAAAGAGCTGAGCTCAGGGCTAGAGAGAGCTATCCAGCTACCATGCTCGAGTCCTCACTTTCACCACCAACTGCATCAAACTTGGATGCGCGTTCAGGAAGCACTAGAAGGGGAATGAATAAGCGTTGTGTGTCCGATGCTGGGGTTGTAAGCTCGTTACAGAAGCCGGAAGAGCCCGACTTCTCCATTGTTGAGGAATGA | 2163 | 44.15 | MRLNPLELQPKPKVSFGKIFMAYGSSRSVRFQDDLETSALPTINGGGVTKIIYNIDGTQIPESSGKRTEVSGKFGRSLRAKVLSRVFSEDYERVQRKILDPRGQVIRRWNKIFLVACLVSLFVDPLFFYLPVVRDEVCIDIGVGLEVVLTTIRSIADVFYTIQIFIKFRTAYVAPSSRVFGRGELVIDPCKIAIRYLLHGFWIDFIAALPVPQVLIWIVIPNLSGSTMTNTKNFLRFFLIFQYLPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGSCWYLLSIERQEACWRKLCTLDESCKDGFFDCHKVDDPQRDSWFKTSNITNSCNPNDPFYQFGIYGDAITFHVTTSPFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIIFAIIMATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWVATRGVDEESLLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALSTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVVLPSSTRTVKAISEVEAFALIADDLKFVSSQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKERAELRARESYPATMLESSLSPPTASNLDARSGSTRRGMNKRCVSDAGVVSSLQKPEEPDFSIVEE | 720 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8194439 | 8198913 | - | Hsped.08g08980.1 | Hepe08g0898 | 576870 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0898 | 720 | FunFam | Cyclic nucleotide-gated ion channel 1 | 498 | 616 | - | - | |
Hepe08g0898 | 720 | PRINTS | EAG/ELK/ERG potassium channel family signature | 164 | 173 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Hepe08g0898 | 720 | PRINTS | EAG/ELK/ERG potassium channel family signature | 281 | 291 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Hepe08g0898 | 720 | PRINTS | EAG/ELK/ERG potassium channel family signature | 395 | 406 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Hepe08g0898 | 720 | PRINTS | EAG/ELK/ERG potassium channel family signature | 463 | 470 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Hepe08g0898 | 720 | PRINTS | EAG/ELK/ERG potassium channel family signature | 369 | 386 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Hepe08g0898 | 720 | PRINTS | EAG/ELK/ERG potassium channel family signature | 413 | 422 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Hepe08g0898 | 720 | SMART | cnmp_10 | 500 | 631 | IPR000595 | - | |
Hepe08g0898 | 720 | Gene3D | Helix hairpin bin | 427 | 491 | - | - | |
Hepe08g0898 | 720 | Pfam | Cyclic nucleotide-binding domain | 523 | 583 | IPR000595 | - | |
Hepe08g0898 | 720 | CDD | CAP_ED | 500 | 631 | IPR000595 | - | |
Hepe08g0898 | 720 | Gene3D | - | 102 | 424 | - | - | |
Hepe08g0898 | 720 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 81 | 665 | - | - | |
Hepe08g0898 | 720 | MobiDBLite | consensus disorder prediction | 669 | 688 | - | - | |
Hepe08g0898 | 720 | Pfam | Ion transport protein | 108 | 427 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe08g0898 | 720 | SUPERFAMILY | cAMP-binding domain-like | 430 | 625 | IPR018490 | - | |
Hepe08g0898 | 720 | MobiDBLite | consensus disorder prediction | 669 | 695 | - | - | |
Hepe08g0898 | 720 | FunFam | Cyclic nucleotide-gated ion channel 1 | 427 | 491 | - | - | |
Hepe08g0898 | 720 | Gene3D | Jelly Rolls | 498 | 618 | IPR014710 | - | |
Hepe08g0898 | 720 | SUPERFAMILY | Voltage-gated potassium channels | 100 | 422 | - | - | |
Hepe08g0898 | 720 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 500 | 597 | IPR000595 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1860 | Hepe-Chr2:28925007 | Hepe08g0898 | Hepe-Chr8:8194439 | 3.01e-241 | dispersed | |
Hepe07g2555 | Hepe-Chr7:69967263 | Hepe08g0898 | Hepe-Chr8:8194439 | 2.09e-125 | dispersed | |
Hepe08g0898 | Hepe-Chr8:8194439 | Hepe09g0522 | Hepe-Chr9:4885919 | 1.36e-258 | dispersed | |
Hepe07g0288 | Hepe-Chr7:2918098 | Hepe08g0898 | Hepe-Chr8:8194439 | 2.12e-115 | transposed | |
Hepe07g1099 | Hepe-Chr7:18441723 | Hepe08g0898 | Hepe-Chr8:8194439 | 1.48e-86 | transposed | |
Hepe04g0941 | Hepe-Chr4:63700715 | Hepe08g0898 | Hepe-Chr8:8194439 | 1.18e-297 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0898 | K05391 | - | csv:101210775 | 1333.55 |