Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0930 | ATGTTTGACATGGAGCAAGTTGGAAAGCATTTCACGATGAACATCAACGACGACTTTGAGCTCCAAGATTTGATCCACGGCGACAATTTCGATCAATATGTCAATCTCATTCGTGGAGATCAGCACGAAAATCCGATATTCAACTTTGATCTTGATTTCATGAATGGTTGCTTGGTCGAAAATCGGCTCGATCCAAGCGCCGATTACATCCTAGATTCGAATATCGTCGTGAATTCTGATCCTAATTCTCTGTTTAGTACATTGGAGAGCTTCAATAGTATGATGAAAGAAGTTGAAAATGAAGACGACGACGAAGACGACACTTCTGTAGAGAATTCTTCAGTTACGACCACGAAATCAAAGGTCGACAGATCCAGAACTTTGATTTCTGAGCGAAGAAGAAGGGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGATGGATAAGGCTTCCATTGTAGGGGATGCAGTGCTATACGTGAAAGAGCTTCAAATGCAGGCCAAGAAGCTGAAAGCAGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACACTTTATCACTCAACTGATCAAACCCACAAGAAGATTCAAACTTCACGTTCAGACCAAACTCTCCCCTGCAAAATAATTCAGCTGGATGTTTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGCTAGTGTGCAAGATGGGTGAAAGAGTAGCCATGTCTCTTTACAAAGTTCTTGAATCTCTTACCAGCTTCAATATTCAAAGCTCCAATTTGGCCTCTGCTGCTGACAGATTCATTCTCACTGCTACAATTCATGTGAGAGATTGTGAGGTGGACATGAACTTGCCAAATCTCAAGCTTTGGCTTACTGGGGCACTTCTTAACCATGGATTTGAGTTTTAA | 924 | 40.91 | MFDMEQVGKHFTMNINDDFELQDLIHGDNFDQYVNLIRGDQHENPIFNFDLDFMNGCLVENRLDPSADYILDSNIVVNSDPNSLFSTLESFNSMMKEVENEDDDEDDTSVENSSVTTTKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKKLKAEISVLESSINETQTLYHSTDQTHKKIQTSRSDQTLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFNIQSSNLASAADRFILTATIHVRDCEVDMNLPNLKLWLTGALLNHGFEF | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8561338 | 8563133 | + | Hsped.08g09300.1 | Hepe08g0930 | 576902 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0930 | 307 | Gene3D | - | 112 | 188 | IPR036638 | GO:0046983(InterPro) | |
Hepe08g0930 | 307 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 99 | 305 | IPR051358 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER) | |
Hepe08g0930 | 307 | Coils | Coil | 168 | 195 | - | - | |
Hepe08g0930 | 307 | Pfam | Helix-loop-helix DNA-binding domain | 127 | 172 | IPR011598 | GO:0046983(InterPro) | |
Hepe08g0930 | 307 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 122 | 171 | IPR011598 | GO:0046983(InterPro) | |
Hepe08g0930 | 307 | MobiDBLite | consensus disorder prediction | 99 | 124 | - | - | |
Hepe08g0930 | 307 | FunFam | Basic helix-loop-helix (BHLH) DNA-binding superfamily protein | 118 | 188 | - | - | |
Hepe08g0930 | 307 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 124 | 199 | IPR036638 | GO:0046983(InterPro) | |
Hepe08g0930 | 307 | SMART | finulus | 128 | 177 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g0930 | Hepe-Chr8:8561338 | Hepe09g0452 | Hepe-Chr9:4087830 | 2.91e-17 | dispersed | |
Hepe08g0930 | Hepe-Chr8:8561338 | Hepe08g2086 | Hepe-Chr8:59143119 | 1.34e-21 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56170 | PF00010 | HLH | 2.60E-09 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0930 | K26214 | - | csv:101213681 | 459.144 |